Functional clusters

Information

  • Type Gene Ontology
  • Description positive regulation of red or far-red light signaling pathway

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group2 3 CH_ach_183 2 2 0.000162964
Avicennia marina ScioBoG_19538_HRSCAF_19626 3 CH_ama_97 2 2 0.000258665
Carica papaya supercontig_17 3 CH_cpa_46 3 3 0.000000013557
Magnolia biondii Chr02 3 CH_mbi_418 2 2 0.0000485661
Malus domestica Chr05 3 CH_mdo_154 3 3 0.00000000862825
Sechium edule LG10 3 CH_sed_235 2 4 0.000428021
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_246 2 2 0.0000929238
Actinidia chinensis Lachesis_group2 4 CH_ach_183 2 2 0.000162964
Avicennia marina ScioBoG_19538_HRSCAF_19626 4 CH_ama_97 2 2 0.000258665
Carica papaya supercontig_17 4 CH_cpa_46 3 3 0.000000013557
Magnolia biondii Chr02 4 CH_mbi_418 2 2 0.0000485661
Malus domestica Chr05 4 CH_mdo_154 3 3 0.00000000862825
Sechium edule LG10 4 CH_sed_235 2 4 0.000428021
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_246 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001