Functional clusters

Information

  • Type Gene Ontology
  • Description systemic acquired resistance

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Contig733 3 CH_camsi_214 5 7 0.0000000256512
Coffea canephora chr6 3 CH_ccan_62 5 35 0.0000000128553
Carya illinoinensis Chr08 3 CH_cil_251 4 4 0.00000247548
Chenopodium quinoa C_Quinoa_Scaffold_1360 3 CH_cqu_497 3 3 0.000496531
Davidia involucrata GWHABJS00000085 3 CH_din_17 9 9 5.34019e-20
Davidia involucrata GWHABJS00000085 3 CH_din_18 9 9 5.34019e-20
Erigeron canadensis Conyza_canadensis_scaffold:5 3 CH_eca_289 3 3 0.000103356
Eucalyptus grandis Chr07 3 CH_egr_306 8 20 0.000000000252298
Erythranthe guttata scaffold_10 3 CH_egut_104 5 5 0.00000000115171
Helianthus annuus HanXRQChr03 3 CH_han_30 12 34 3.28936e-20
Lactuca sativa Lsat_1_v8_lg_7 3 CH_lsa_93 7 17 0.0000000000453478
Quercus lobata CM012294 3 CH_qlo_452 5 8 0.000000191192
Salvia bowleyana GWHASIU00000002 3 CH_sbo_46 10 23 5.52105e-18
Selaginella moellendorffii scaffold_42 3 CH_smo_45 5 6 0.0000000820014
Tripterygium wilfordii NC_052254.1 3 CH_twi_29 7 7 0.000000000000282219
Camellia sinensis var. sinensis Contig733 4 CH_camsi_214 5 7 0.0000000256512
Coffea canephora chr6 4 CH_ccan_62 5 35 0.0000000128553
Carya illinoinensis Chr08 4 CH_cil_251 4 4 0.00000247548
Chenopodium quinoa C_Quinoa_Scaffold_1360 4 CH_cqu_497 3 3 0.000496531
Davidia involucrata GWHABJS00000085 4 CH_din_17 9 9 5.34019e-20
Davidia involucrata GWHABJS00000085 4 CH_din_18 9 9 5.34019e-20
Erigeron canadensis Conyza_canadensis_scaffold:5 4 CH_eca_289 3 3 0.000103356
Eucalyptus grandis Chr07 4 CH_egr_306 8 20 0.000000000252298
Erythranthe guttata scaffold_10 4 CH_egut_104 5 5 0.00000000115171
Helianthus annuus HanXRQChr03 4 CH_han_30 12 34 3.28936e-20
Lactuca sativa Lsat_1_v8_lg_7 4 CH_lsa_93 7 17 0.0000000000453478
Quercus lobata CM012294 4 CH_qlo_452 5 8 0.000000191192
Salvia bowleyana GWHASIU00000002 4 CH_sbo_46 10 23 5.52105e-18
Selaginella moellendorffii scaffold_42 4 CH_smo_45 5 6 0.0000000820014
Tripterygium wilfordii NC_052254.1 4 CH_twi_29 7 7 0.000000000000282219

Available child term results

Ontology identifier Description Number of clusters
GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway 12
GO:0010112 regulation of systemic acquired resistance 38
GO:1901672 positive regulation of systemic acquired resistance 8

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001