Functional clusters
Information
- Type Gene Ontology
- Description systemic acquired resistance, salicylic acid mediated signaling pathway
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Citrus clementina | scaffold_4 | 3 | CH_ccl_11 | 14 | 19 | 2.18412e-33 |
| Fragaria vesca | Fvb6 | 3 | CH_fve_196 | 3 | 3 | 0.00000801688 |
| Nelumbo nucifera | chr7 | 3 | CH_nnu_153 | 3 | 3 | 0.0000101801 |
| Papaver somniferum | NC_039359.1 | 3 | CH_pso_419 | 3 | 4 | 0.0000278238 |
| Papaver somniferum | NC_039359.1 | 3 | CH_pso_67 | 6 | 9 | 0.0000000000000357596 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 3 | CH_rch_394 | 3 | 3 | 0.0000042219 |
| Citrus clementina | scaffold_4 | 4 | CH_ccl_11 | 14 | 19 | 2.18412e-33 |
| Fragaria vesca | Fvb6 | 4 | CH_fve_196 | 3 | 3 | 0.00000801688 |
| Nelumbo nucifera | chr7 | 4 | CH_nnu_153 | 3 | 3 | 0.0000101801 |
| Papaver somniferum | NC_039359.1 | 4 | CH_pso_419 | 3 | 4 | 0.0000278238 |
| Papaver somniferum | NC_039359.1 | 4 | CH_pso_67 | 6 | 9 | 0.0000000000000357596 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 4 | CH_rch_394 | 3 | 3 | 0.0000042219 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |