Functional clusters

Information

  • Type Gene Ontology
  • Description photosystem

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_2 3 CH_aly_269 3 3 0.000299046
Brassica napus C04 3 CH_bna_657 4 13 0.000774852
Helianthus annuus HanXRQChr02 3 CH_han_561 4 7 0.000179048
Rosa chinensis RcHm_v2.0_Chr6 3 CH_rch_567 3 3 0.000104129
Arabidopsis lyrata scaffold_2 4 CH_aly_269 3 3 0.000299046
Brassica napus C04 4 CH_bna_657 4 13 0.000774852
Helianthus annuus HanXRQChr02 4 CH_han_561 4 7 0.000179048
Rosa chinensis RcHm_v2.0_Chr6 4 CH_rch_567 3 3 0.000104129

Available child term results

Ontology identifier Description Number of clusters
GO:0009522 photosystem I 8
GO:0009523 photosystem II 14
GO:0009538 photosystem I reaction center 4
GO:0009539 photosystem II reaction center 16
GO:0009654 photosystem II oxygen evolving complex 8
GO:0009782 photosystem I antenna complex 2
GO:0009783 photosystem II antenna complex 6
GO:0030093 chloroplast photosystem I 2
GO:0030095 chloroplast photosystem II 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001