Functional clusters

Information

  • Type Gene Ontology
  • Description photosystem II

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC07 3 CH_bca_213 4 4 0.0000000715517
Gossypium hirsutum D06 3 CH_ghi_284 4 4 0.00000146425
Gossypium hirsutum A13 3 CH_ghi_640 3 3 0.000703028
Gossypium hirsutum D08 3 CH_ghi_641 3 3 0.000703028
Gossypium hirsutum D13 3 CH_ghi_642 3 3 0.000703028
Gossypium raimondii Chr13 3 CH_gra_274 3 3 0.000171205
Nelumbo nucifera scaffold020 3 CH_nnu_218 4 19 0.000143827
Brassica carinata ChrC07 4 CH_bca_213 4 4 0.0000000715517
Gossypium hirsutum D06 4 CH_ghi_284 4 4 0.00000146425
Gossypium hirsutum A13 4 CH_ghi_640 3 3 0.000703028
Gossypium hirsutum D08 4 CH_ghi_641 3 3 0.000703028
Gossypium hirsutum D13 4 CH_ghi_642 3 3 0.000703028
Gossypium raimondii Chr13 4 CH_gra_274 3 3 0.000171205
Nelumbo nucifera scaffold020 4 CH_nnu_218 4 19 0.000143827

Available child term results

Ontology identifier Description Number of clusters
GO:0009539 photosystem II reaction center 16
GO:0009654 photosystem II oxygen evolving complex 8
GO:0009783 photosystem II antenna complex 6
GO:0030095 chloroplast photosystem II 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001