Functional clusters
Information
- Type Gene Ontology
- Description photosystem II reaction center
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr3 | 3 | CH_acertr_394 | 2 | 2 | 0.000211491 |
| Camellia sinensis var. sinensis | Chr12 | 3 | CH_camsi_428 | 3 | 11 | 0.0000104022 |
| Capsicum annuum | PGAv.1.6.scaffold201 | 3 | CH_can_231 | 3 | 3 | 0.00000573281 |
| Capsella rubella | scaffold_1 | 3 | CH_cru_276 | 2 | 2 | 0.000219346 |
| Fragaria x ananassa | Fvb2-1 | 3 | CH_fan_385 | 2 | 2 | 0.000111022 |
| Lactuca sativa | Lsat_1_v8_lg_9 | 3 | CH_lsa_265 | 3 | 4 | 0.00000721107 |
| Oryza sativa ssp. japonica | chr03 | 3 | CH_osa_466 | 2 | 2 | 0.000792184 |
| Simmondsia chinensis | GWHAASQ00000004 | 3 | CH_sci_102 | 3 | 5 | 0.00000608718 |
| Acer truncatum | chr3 | 4 | CH_acertr_394 | 2 | 2 | 0.000211491 |
| Camellia sinensis var. sinensis | Chr12 | 4 | CH_camsi_428 | 3 | 11 | 0.0000104022 |
| Capsicum annuum | PGAv.1.6.scaffold201 | 4 | CH_can_231 | 3 | 3 | 0.00000573281 |
| Capsella rubella | scaffold_1 | 4 | CH_cru_276 | 2 | 2 | 0.000219346 |
| Fragaria x ananassa | Fvb2-1 | 4 | CH_fan_385 | 2 | 2 | 0.000111022 |
| Lactuca sativa | Lsat_1_v8_lg_9 | 4 | CH_lsa_265 | 3 | 4 | 0.00000721107 |
| Oryza sativa ssp. japonica | chr03 | 4 | CH_osa_466 | 2 | 2 | 0.000792184 |
| Simmondsia chinensis | GWHAASQ00000004 | 4 | CH_sci_102 | 3 | 5 | 0.00000608718 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |