Functional clusters

Information

  • Type Gene Ontology
  • Description cellular response to DNA damage stimulus

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Erigeron canadensis Conyza_canadensis_scaffold:4 3 CH_eca_168 6 9 0.00000210518
Sequoiadendron giganteum chr3 3 CH_sgi_161 12 15 1.13783e-16
Vigna mungo CM024072.1 3 CH_vmu_88 6 7 0.000000129647
Erigeron canadensis Conyza_canadensis_scaffold:4 4 CH_eca_168 6 9 0.00000210518
Sequoiadendron giganteum chr3 4 CH_sgi_161 12 15 1.13783e-16
Vigna mungo CM024072.1 4 CH_vmu_88 6 7 0.000000129647

Available child term results

Ontology identifier Description Number of clusters
GO:0000012 single strand break repair 6
GO:0000706 meiotic DNA double-strand break processing 4
GO:0000719 photoreactive repair 12
GO:0000720 pyrimidine dimer repair by nucleotide-excision repair 2
GO:0000724 double-strand break repair via homologous recombination 6
GO:0000731 DNA synthesis involved in DNA repair 4
GO:0006281 DNA repair 16
GO:0006282 regulation of DNA repair 2
GO:0006283 transcription-coupled nucleotide-excision repair 6
GO:0006289 nucleotide-excision repair 8
GO:0006294 nucleotide-excision repair, preincision complex assembly 2
GO:0006303 double-strand break repair via nonhomologous end joining 2
GO:0007095 mitotic G2 DNA damage checkpoint signaling 8
GO:0010213 non-photoreactive DNA repair 2
GO:0010569 regulation of double-strand break repair via homologous recombination 8
GO:0010767 regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage 4
GO:0010777 meiotic mismatch repair involved in reciprocal meiotic recombination 8
GO:0031848 protection from non-homologous end joining at telomere 2
GO:0036297 interstrand cross-link repair 12
GO:0042276 error-prone translesion synthesis 36
GO:0043247 telomere maintenance in response to DNA damage 8
GO:0045003 double-strand break repair via synthesis-dependent strand annealing 2
GO:0045739 positive regulation of DNA repair 4
GO:0051103 DNA ligation involved in DNA repair 24
GO:0070716 mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication 4
GO:0097510 base-excision repair, AP site formation via deaminated base removal 12
GO:1905168 positive regulation of double-strand break repair via homologous recombination 4
GO:1990918 double-strand break repair involved in meiotic recombination 2
GO:2000042 negative regulation of double-strand break repair via homologous recombination 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001