Functional clusters
Information
- Type Gene Ontology
- Description transcription coregulator activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00012 | 3 | CH_atr_300 | 3 | 3 | 0.000495994 |
| Magnolia biondii | Chr04 | 3 | CH_mbi_568 | 3 | 3 | 0.000388255 |
| Medicago truncatula | chr4 | 3 | CH_mtr_521 | 4 | 6 | 0.0000737221 |
| Sequoiadendron giganteum | chr2 | 3 | CH_sgi_1300 | 6 | 71 | 0.000490464 |
| Trochodendron aralioides | group12 | 3 | CH_tar_231 | 4 | 5 | 0.0000201088 |
| Amborella trichopoda | AmTr_v1.0_scaffold00012 | 4 | CH_atr_300 | 3 | 3 | 0.000495994 |
| Magnolia biondii | Chr04 | 4 | CH_mbi_568 | 3 | 3 | 0.000388255 |
| Medicago truncatula | chr4 | 4 | CH_mtr_521 | 4 | 6 | 0.0000737221 |
| Sequoiadendron giganteum | chr2 | 4 | CH_sgi_1300 | 6 | 71 | 0.000490464 |
| Trochodendron aralioides | group12 | 4 | CH_tar_231 | 4 | 5 | 0.0000201088 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0003713 | transcription coactivator activity | 24 |
| GO:0003714 | transcription corepressor activity | 116 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |