Functional clusters
Information
- Type Gene Ontology
- Description transcription coactivator activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_228 | 3 | CH_aag_24 | 5 | 7 | 0.0000000000404091 |
| Capsicum annuum | PGAv.1.6.scaffold186 | 3 | CH_can_179 | 6 | 69 | 0.000000388999 |
| Carpinus fangiana | Cfa01 | 3 | CH_cfa_100 | 4 | 7 | 0.0000000621972 |
| Eucalyptus grandis | Chr03 | 3 | CH_egr_726 | 3 | 5 | 0.000103898 |
| Fragaria vesca | Fvb3 | 3 | CH_fve_144 | 4 | 8 | 0.000000379479 |
| Medicago truncatula | chr8 | 3 | CH_mtr_378 | 6 | 74 | 0.00000244901 |
| Punica granatum | NC_045134.1 | 3 | CH_pgr_47 | 7 | 25 | 0.000000000000779096 |
| Papaver somniferum | NC_039359.1 | 3 | CH_pso_231 | 4 | 5 | 0.000000050207 |
| Papaver somniferum | NC_039359.1 | 3 | CH_pso_315 | 4 | 9 | 0.00000126293 |
| Rhododendron simsii | chr01 | 3 | CH_rsi_294 | 3 | 3 | 0.00000830787 |
| Sequoiadendron giganteum | chr8 | 3 | CH_sgi_479 | 5 | 13 | 0.00000000437278 |
| Solanum pennellii | Spenn-ch04 | 3 | CH_spe_43 | 8 | 67 | 0.00000000000072776 |
| Anthoceros agrestis | Sc2ySwM_228 | 4 | CH_aag_24 | 5 | 7 | 0.0000000000404091 |
| Capsicum annuum | PGAv.1.6.scaffold186 | 4 | CH_can_179 | 6 | 69 | 0.000000388999 |
| Carpinus fangiana | Cfa01 | 4 | CH_cfa_100 | 4 | 7 | 0.0000000621972 |
| Eucalyptus grandis | Chr03 | 4 | CH_egr_726 | 3 | 5 | 0.000103898 |
| Fragaria vesca | Fvb3 | 4 | CH_fve_144 | 4 | 8 | 0.000000379479 |
| Medicago truncatula | chr8 | 4 | CH_mtr_378 | 6 | 74 | 0.00000244901 |
| Punica granatum | NC_045134.1 | 4 | CH_pgr_47 | 7 | 25 | 0.000000000000779096 |
| Papaver somniferum | NC_039359.1 | 4 | CH_pso_231 | 4 | 5 | 0.000000050207 |
| Papaver somniferum | NC_039359.1 | 4 | CH_pso_315 | 4 | 9 | 0.00000126293 |
| Rhododendron simsii | chr01 | 4 | CH_rsi_294 | 3 | 3 | 0.00000830787 |
| Sequoiadendron giganteum | chr8 | 4 | CH_sgi_479 | 5 | 13 | 0.00000000437278 |
| Solanum pennellii | Spenn-ch04 | 4 | CH_spe_43 | 8 | 67 | 0.00000000000072776 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |