Functional clusters

Information

  • Type Gene Ontology
  • Description response to oomycetes

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_362 3 CH_aag_87 4 7 0.0000184215
Carya illinoinensis Chr09 3 CH_cil_319 4 5 0.0000443578
Daucus carota DCARv2_Chr1 3 CH_dca_402 3 3 0.000844547
Glycine max Gm16 3 CH_gma_21 16 80 2.89902e-20
Helianthus annuus HanXRQChr14 3 CH_han_482 4 7 0.0000642659
Rhododendron simsii chr03 3 CH_rsi_538 4 13 0.000989852
Salvia bowleyana GWHASIU00000005 3 CH_sbo_24 13 23 3.13967e-24
Schrenkiella parvula ch7-6 3 CH_spa_217 3 3 0.000793384
Anthoceros agrestis Sc2ySwM_362 4 CH_aag_87 4 7 0.0000184215
Carya illinoinensis Chr09 4 CH_cil_319 4 5 0.0000443578
Daucus carota DCARv2_Chr1 4 CH_dca_402 3 3 0.000844547
Glycine max Gm16 4 CH_gma_21 16 80 2.89902e-20
Helianthus annuus HanXRQChr14 4 CH_han_482 4 7 0.0000642659
Rhododendron simsii chr03 4 CH_rsi_538 4 13 0.000989852
Salvia bowleyana GWHASIU00000005 4 CH_sbo_24 13 23 3.13967e-24
Schrenkiella parvula ch7-6 4 CH_spa_217 3 3 0.000793384

Available child term results

Ontology identifier Description Number of clusters
GO:0002229 defense response to oomycetes 16
GO:0002240 response to molecule of oomycetes origin 4
GO:1902288 regulation of defense response to oomycetes 40
GO:1902289 negative regulation of defense response to oomycetes 4
GO:1902290 positive regulation of defense response to oomycetes 22

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001