Functional clusters

Information

  • Type MapMan
  • Description Coenzyme metabolism.iron-sulfur cluster assembly machinery

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-11 1 CH_aar_89 4 5 0.00000154415
Aethionema arabicum LG-11 2 CH_aar_89 4 5 0.00000154415

Available child term results

Ontology identifier Description Number of clusters
7.11.1.1.1 Coenzyme metabolism.iron-sulfur cluster assembly machinery.plastidial SUF system.assembly phase.SUF-BCD scaffold complex 2
7.11.1.1.1.1 Coenzyme metabolism.iron-sulfur cluster assembly machinery.plastidial SUF system.assembly phase.SUF-BCD scaffold complex.component SUF-B 2
7.11.1.1.1.2 Coenzyme metabolism.iron-sulfur cluster assembly machinery.plastidial SUF system.assembly phase.SUF-BCD scaffold complex.component SUF-C 2
7.11.1.1.1.3 Coenzyme metabolism.iron-sulfur cluster assembly machinery.plastidial SUF system.assembly phase.SUF-BCD scaffold complex.component SUF-D 8
7.11.1.1.2.1 Coenzyme metabolism.iron-sulfur cluster assembly machinery.plastidial SUF system.assembly phase.SUF-SE sulfur transfer complex.cysteine desulfurase component NFS2 5
7.11.1.1.2.2 Coenzyme metabolism.iron-sulfur cluster assembly machinery.plastidial SUF system.assembly phase.SUF-SE sulfur transfer complex.component SUF-E1 2
7.11.1.1.2.3 Coenzyme metabolism.iron-sulfur cluster assembly machinery.plastidial SUF system.assembly phase.SUF-SE sulfur transfer complex.cysteine desulfurase activator component SUF-E2/3 5
7.11.1.2.1 Coenzyme metabolism.iron-sulfur cluster assembly machinery.plastidial SUF system.transfer phase.scaffold protein (SUF-A) 2
7.11.1.2.2 Coenzyme metabolism.iron-sulfur cluster assembly machinery.plastidial SUF system.transfer phase.scaffold protein (NFU1/2/3) 6
7.11.1.2.4 Coenzyme metabolism.iron-sulfur cluster assembly machinery.plastidial SUF system.transfer phase.assembly factor (IBA57) 2
7.11.1.2.5 Coenzyme metabolism.iron-sulfur cluster assembly machinery.plastidial SUF system.transfer phase.redox-dependent regulator (BolA4) 2
7.11.1.2.6 Coenzyme metabolism.iron-sulfur cluster assembly machinery.plastidial SUF system.transfer phase.redox-dependent regulator (BolA2) 2
7.11.2.1.1 Coenzyme metabolism.iron-sulfur cluster assembly machinery.mitochondrial ISC system.assembly phase.cysteine desulfurase (NFS1) 4
7.11.2.1.2 Coenzyme metabolism.iron-sulfur cluster assembly machinery.mitochondrial ISC system.assembly phase.scaffold protein (ISU) 11
7.11.2.1.5 Coenzyme metabolism.iron-sulfur cluster assembly machinery.mitochondrial ISC system.assembly phase.adrenodoxin 6
7.11.2.1.6 Coenzyme metabolism.iron-sulfur cluster assembly machinery.mitochondrial ISC system.assembly phase.adrenodoxin oxidoreductase 12
7.11.2.2.2 Coenzyme metabolism.iron-sulfur cluster assembly machinery.mitochondrial ISC system.transfer phase.scaffold protein (NFU4/5) 4
7.11.2.2.4 Coenzyme metabolism.iron-sulfur cluster assembly machinery.mitochondrial ISC system.transfer phase.assembly factor (IBA57) 4
7.11.2.2.5 Coenzyme metabolism.iron-sulfur cluster assembly machinery.mitochondrial ISC system.transfer phase.chaperone (HSCA) 16
7.11.2.2.6 Coenzyme metabolism.iron-sulfur cluster assembly machinery.mitochondrial ISC system.transfer phase.chaperone (HSCB) 2
7.11.2.3.1 Coenzyme metabolism.iron-sulfur cluster assembly machinery.mitochondrial ISC system.export machinery.transport protein (ATM) 11
7.11.2.3.2 Coenzyme metabolism.iron-sulfur cluster assembly machinery.mitochondrial ISC system.export machinery.sulfhydryl oxidase (ERV1) 2
7.11.3.1.1.1 Coenzyme metabolism.iron-sulfur cluster assembly machinery.cytosolic CIA system.assembly phase.electron donor complex.component DRE2 10
7.11.3.1.2 Coenzyme metabolism.iron-sulfur cluster assembly machinery.cytosolic CIA system.assembly phase.scaffold protein (NBP35) 10
7.11.3.2.1 Coenzyme metabolism.iron-sulfur cluster assembly machinery.cytosolic CIA system.transfer phase.assembly factor (CIA1) 4
7.11.3.2.2 Coenzyme metabolism.iron-sulfur cluster assembly machinery.cytosolic CIA system.transfer phase.carrier protein (CIA2/AE7) 8
7.11.3.2.3 Coenzyme metabolism.iron-sulfur cluster assembly machinery.cytosolic CIA system.transfer phase.assembly factor (MMS19) 21
7.11.3.2.4 Coenzyme metabolism.iron-sulfur cluster assembly machinery.cytosolic CIA system.transfer phase.assembly factor (NAR1) 2
7.11.4.1 Coenzyme metabolism.iron-sulfur cluster assembly machinery.plastid-to-cytosol iron-sulfur cluster transfer.transfer factor (NEET) 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001