Functional clusters

Information

  • Type MapMan
  • Description Coenzyme metabolism.iron-sulfur cluster assembly machinery.mitochondrial ISC system.transfer phase.chaperone (HSCA)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Capsicum annuum PGAv.1.6.scaffold504 1 CH_can_383 2 4 0.000495622
Gossypium raimondii Chr08 1 CH_gra_100 3 3 0.00000000431127
Helianthus annuus HanXRQChr05 1 CH_han_619 2 3 0.000347775
Physcomitrium patens Chr01 1 CH_ppa_242 2 2 0.000367636
Solanum lycopersicum SL4.0ch01 1 CH_sly_455 2 4 0.000352144
Solanum pennellii Spenn-ch01 1 CH_spe_415 2 4 0.000266862
Solanum tuberosum ST4.03ch01 1 CH_stu_499 2 4 0.000307456
Capsicum annuum PGAv.1.6.scaffold504 2 CH_can_383 2 4 0.000495622
Gossypium hirsutum A12 2 CH_ghi_700 2 2 0.000400523
Gossypium hirsutum D12 2 CH_ghi_701 2 2 0.000400523
Gossypium raimondii Chr08 2 CH_gra_100 3 3 0.00000000431127
Helianthus annuus HanXRQChr05 2 CH_han_619 2 3 0.000347775
Physcomitrium patens Chr01 2 CH_ppa_242 2 2 0.000367636
Solanum lycopersicum SL4.0ch01 2 CH_sly_455 2 4 0.000352144
Solanum pennellii Spenn-ch01 2 CH_spe_415 2 4 0.000266862
Solanum tuberosum ST4.03ch01 2 CH_stu_499 2 4 0.000307456

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001