Functional clusters

Information

  • Type MapMan
  • Description Coenzyme metabolism.iron-sulfur cluster assembly machinery.cytosolic CIA system.transfer phase.assembly factor (MMS19)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Beta vulgaris Chr9_EL10_PGA_scaffold8 1 CH_bvu_180 2 2 0.0000827917
Camellia sinensis var. sinensis Chr15 1 CH_camsi_190 3 3 0.00000000315406
Ceratophyllum demersum 3 1 CH_cde_105 2 2 0.0000789796
Citrullus lanatus CG_Chr09 1 CH_cla_123 2 2 0.0000887115
Carica papaya supercontig_25 1 CH_cpa_60 3 5 0.000000135557
Quercus lobata 5 1 CH_qlo_865 2 4 0.000309757
Salix brachista GWHAAZH00000003 1 CH_sbr_227 2 2 0.000063014
Sapria himalayana scaffold13_12996478 1 CH_shi_13 4 6 0.00000000000841332
Trochodendron aralioides group9 1 CH_tar_101 3 3 0.000000021627
Trifolium pratense Tp57577_TGAC_v2_scaf_307 1 CH_tpr_393 2 3 0.000681233
Beta vulgaris Chr9_EL10_PGA_scaffold8 2 CH_bvu_180 2 2 0.0000827917
Camellia sinensis var. sinensis Chr15 2 CH_camsi_190 3 3 0.00000000315406
Ceratophyllum demersum 3 2 CH_cde_105 2 2 0.0000789796
Citrullus lanatus CG_Chr09 2 CH_cla_123 2 2 0.0000887115
Carica papaya supercontig_25 2 CH_cpa_60 3 5 0.000000135557
Lotus japonicus chr1 2 CH_lja_300 2 3 0.000214516
Quercus lobata 5 2 CH_qlo_865 2 4 0.000309757
Salix brachista GWHAAZH00000003 2 CH_sbr_227 2 2 0.000063014
Sapria himalayana scaffold13_12996478 2 CH_shi_13 4 6 0.00000000000841332
Trochodendron aralioides group9 2 CH_tar_101 3 3 0.000000021627
Trifolium pratense Tp57577_TGAC_v2_scaf_307 2 CH_tpr_393 2 3 0.000681233

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001