Functional clusters
Information
- Type MapMan
- Description Enzyme classification.EC_4 lyases
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Brassica carinata | ChrC07 | 1 | CH_bca_546 | 6 | 66 | 0.0000241684 |
Capsicum annuum | PGAv.1.6.scaffold982 | 1 | CH_can_299 | 4 | 12 | 0.000102238 |
Carpinus fangiana | Cfa05 | 1 | CH_cfa_210 | 3 | 3 | 0.000061432 |
Punica granatum | NC_045127.1 | 1 | CH_pgr_302 | 3 | 6 | 0.000438282 |
Rhododendron simsii | chr03 | 1 | CH_rsi_572 | 4 | 30 | 0.000779081 |
Brassica carinata | ChrC07 | 2 | CH_bca_546 | 6 | 66 | 0.0000241684 |
Capsicum annuum | PGAv.1.6.scaffold982 | 2 | CH_can_299 | 4 | 12 | 0.000102238 |
Carpinus fangiana | Cfa05 | 2 | CH_cfa_210 | 3 | 3 | 0.000061432 |
Punica granatum | NC_045127.1 | 2 | CH_pgr_302 | 3 | 6 | 0.000438282 |
Rhododendron simsii | chr03 | 2 | CH_rsi_572 | 4 | 30 | 0.000779081 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
50.4.1 | Enzyme classification.EC_4 lyases.EC_4.1 carbon-carbon lyase | 14 |
50.4.2 | Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase | 99 |
50.4.3 | Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen lyase | 173 |
50.4.4 | Enzyme classification.EC_4 lyases.EC_4.4 carbon-sulfur lyase | 14 |
50.4.5 | Enzyme classification.EC_4 lyases.EC_4.6 phosphorus-oxygen lyase | 7 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |