Functional clusters

Information

  • Type MapMan
  • Description Enzyme classification.EC_4 lyases

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC07 1 CH_bca_546 6 66 0.0000241684
Capsicum annuum PGAv.1.6.scaffold982 1 CH_can_299 4 12 0.000102238
Carpinus fangiana Cfa05 1 CH_cfa_210 3 3 0.000061432
Punica granatum NC_045127.1 1 CH_pgr_302 3 6 0.000438282
Rhododendron simsii chr03 1 CH_rsi_572 4 30 0.000779081
Brassica carinata ChrC07 2 CH_bca_546 6 66 0.0000241684
Capsicum annuum PGAv.1.6.scaffold982 2 CH_can_299 4 12 0.000102238
Carpinus fangiana Cfa05 2 CH_cfa_210 3 3 0.000061432
Punica granatum NC_045127.1 2 CH_pgr_302 3 6 0.000438282
Rhododendron simsii chr03 2 CH_rsi_572 4 30 0.000779081

Available child term results

Ontology identifier Description Number of clusters
50.4.1 Enzyme classification.EC_4 lyases.EC_4.1 carbon-carbon lyase 14
50.4.2 Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase 99
50.4.3 Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen lyase 173
50.4.4 Enzyme classification.EC_4 lyases.EC_4.4 carbon-sulfur lyase 14
50.4.5 Enzyme classification.EC_4 lyases.EC_4.6 phosphorus-oxygen lyase 7

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001