Functional clusters

Information

  • Type MapMan
  • Description External stimuli response.virus

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Rosa chinensis RcHm_v2.0_Chr3 1 CH_rch_529 3 7 0.0000807664
Salvia bowleyana GWHASIU00000002 1 CH_sbo_362 3 9 0.0002523
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_393 3 9 0.000737499
Rosa chinensis RcHm_v2.0_Chr3 2 CH_rch_529 3 7 0.0000807664
Salvia bowleyana GWHASIU00000002 2 CH_sbo_362 3 9 0.0002523
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_393 3 9 0.000737499

Available child term results

Ontology identifier Description Number of clusters
26.11.1.1 External stimuli response.virus.virus movement.plasmodesmal protein (PDLP) 13
26.11.2 External stimuli response.virus.tobamovirus multiplication 6
26.11.2.1 External stimuli response.virus.tobamovirus multiplication.replication host factor (TOM1) 6
26.11.2.2 External stimuli response.virus.tobamovirus multiplication.replication host factor (TOM2A) 6
26.11.2.3 External stimuli response.virus.tobamovirus multiplication.replication host factor (TOM2B) 2
26.11.2.4 External stimuli response.virus.tobamovirus multiplication.small GTPase (ARL8) 12
26.11.3.1 External stimuli response.virus.virus infection.susceptibility factor (EXA1) 16
26.11.3.2 External stimuli response.virus.virus infection.resistance factor (BTR1) 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001