Functional clusters
Information
- Type MapMan
- Description External stimuli response.virus.virus movement.plasmodesmal protein (PDLP)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00010 | 1 | CH_atr_335 | 2 | 2 | 0.000794407 |
| Brassica carinata | ChrC03 | 1 | CH_bca_34 | 5 | 8 | 0.000000000000263295 |
| Brassica napus | C02 | 1 | CH_bna_83 | 5 | 19 | 0.000000000159878 |
| Brassica oleracea | C2 | 1 | CH_bol_186 | 3 | 7 | 0.00000672818 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 1 | CH_eca_199 | 3 | 6 | 0.00000211367 |
| Helianthus annuus | HanXRQChr12 | 1 | CH_han_21 | 7 | 8 | 4.08014e-20 |
| Sechium edule | LG03 | 1 | CH_sed_57 | 4 | 5 | 0.00000000545089 |
| Amborella trichopoda | AmTr_v1.0_scaffold00010 | 2 | CH_atr_335 | 2 | 2 | 0.000794407 |
| Brassica carinata | ChrC03 | 2 | CH_bca_34 | 5 | 8 | 0.000000000000263295 |
| Brassica oleracea | C2 | 2 | CH_bol_186 | 3 | 7 | 0.00000672818 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 2 | CH_eca_199 | 3 | 6 | 0.00000211367 |
| Helianthus annuus | HanXRQChr12 | 2 | CH_han_21 | 7 | 8 | 4.08014e-20 |
| Sechium edule | LG03 | 2 | CH_sed_57 | 4 | 5 | 0.00000000545089 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |