Functional clusters
Information
- Type MapMan
- Description External stimuli response.virus.tobamovirus multiplication
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Camellia sinensis var. sinensis | Chr12 | 1 | CH_camsi_305 | 4 | 13 | 0.00000028175 |
| Carya illinoinensis | Chr12 | 1 | CH_cil_377 | 3 | 7 | 0.000112804 |
| Nelumbo nucifera | chr1 | 1 | CH_nnu_301 | 3 | 11 | 0.0000977433 |
| Camellia sinensis var. sinensis | Chr12 | 2 | CH_camsi_305 | 4 | 13 | 0.00000028175 |
| Carya illinoinensis | Chr12 | 2 | CH_cil_377 | 3 | 7 | 0.000112804 |
| Nelumbo nucifera | chr1 | 2 | CH_nnu_301 | 3 | 11 | 0.0000977433 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| 26.11.2.1 | External stimuli response.virus.tobamovirus multiplication.replication host factor (TOM1) | 6 |
| 26.11.2.2 | External stimuli response.virus.tobamovirus multiplication.replication host factor (TOM2A) | 6 |
| 26.11.2.3 | External stimuli response.virus.tobamovirus multiplication.replication host factor (TOM2B) | 2 |
| 26.11.2.4 | External stimuli response.virus.tobamovirus multiplication.small GTPase (ARL8) | 12 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |