Functional clusters

Information

  • Type MapMan
  • Description Protein modification.targeting peptide maturation.endomembrane system

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Fragaria x ananassa Fvb7-1 1 CH_fan_328 4 13 0.0000300798
Fragaria x ananassa Fvb7-2 1 CH_fan_357 4 15 0.0000573536
Fragaria x ananassa Fvb7-2 1 CH_fan_382 4 17 0.0000998765
Fragaria x ananassa Fvb7-1 2 CH_fan_328 4 13 0.0000300798
Fragaria x ananassa Fvb7-2 2 CH_fan_357 4 15 0.0000573536
Fragaria x ananassa Fvb7-2 2 CH_fan_382 4 17 0.0000998765

Available child term results

Ontology identifier Description Number of clusters
18.11.1.1.1 Protein modification.targeting peptide maturation.endomembrane system.SPC endoplasmic signal peptidase complex.catalytic component SEC11 16
18.11.1.1.2 Protein modification.targeting peptide maturation.endomembrane system.SPC endoplasmic signal peptidase complex.component SPCs1 2
18.11.1.1.3 Protein modification.targeting peptide maturation.endomembrane system.SPC endoplasmic signal peptidase complex.component SPCs2 31
18.11.1.1.4 Protein modification.targeting peptide maturation.endomembrane system.SPC endoplasmic signal peptidase complex.component SPCs3 12
18.11.1.3 Protein modification.targeting peptide maturation.endomembrane system.site-2 protease (S2P) 6
18.11.1.4 Protein modification.targeting peptide maturation.endomembrane system.signal peptidase (SPP) 18
18.11.1.5.1 Protein modification.targeting peptide maturation.endomembrane system.gamma secretase complex.catalytic component PS 8
18.11.1.5.2 Protein modification.targeting peptide maturation.endomembrane system.gamma secretase complex.component NCT 4
18.11.1.5.3 Protein modification.targeting peptide maturation.endomembrane system.gamma secretase complex.component PEN2 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001