Functional clusters

Information

  • Type MapMan
  • Description Protein modification.targeting peptide maturation.endomembrane system.SPC endoplasmic signal peptidase complex.component SPCs2

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_228 1 CH_aag_97 2 2 0.0000802568
Amborella trichopoda AmTr_v1.0_scaffold00029 1 CH_atr_277 2 4 0.000476607
Coffea canephora chr2 1 CH_ccan_127 2 4 0.00000425891
Cardamine hirsuta Chr4 1 CH_chi_354 2 2 0.000414723
Cardamine hirsuta Chr8 1 CH_chi_355 2 2 0.000414723
Citrullus lanatus CG_Chr07 1 CH_cla_118 2 2 0.0000887115
Erythranthe guttata scaffold_6 1 CH_egut_341 2 3 0.000218436
Lonicera japonica GWHAAZE00000001 1 CH_lonja_369 2 2 0.0000598874
Magnolia biondii Chr14 1 CH_mbi_78 5 18 0.0000000000449897
Prunus persica Pp02 1 CH_ppe_403 2 2 0.000223789
Rosa chinensis RcHm_v2.0_Chr1 1 CH_rch_581 2 2 0.000119596
Salvia bowleyana GWHASIU00000002 1 CH_sbo_334 2 2 0.000136494
Trochodendron aralioides group2 1 CH_tar_427 2 2 0.00036022
Tripterygium wilfordii NC_052232.1 1 CH_twi_280 2 2 0.000557507
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_320 2 2 0.000278772
Anthoceros agrestis Sc2ySwM_228 2 CH_aag_97 2 2 0.0000802568
Amborella trichopoda AmTr_v1.0_scaffold00029 2 CH_atr_277 2 4 0.000476607
Coffea canephora chr2 2 CH_ccan_127 2 4 0.00000425891
Cardamine hirsuta Chr4 2 CH_chi_354 2 2 0.000414723
Cardamine hirsuta Chr8 2 CH_chi_355 2 2 0.000414723
Citrullus lanatus CG_Chr07 2 CH_cla_118 2 2 0.0000887115
Erythranthe guttata scaffold_6 2 CH_egut_341 2 3 0.000218436
Lotus japonicus Contig00357 2 CH_lja_355 2 4 0.000429016
Lonicera japonica GWHAAZE00000001 2 CH_lonja_369 2 2 0.0000598874
Magnolia biondii Chr14 2 CH_mbi_78 5 18 0.0000000000449897
Prunus persica Pp02 2 CH_ppe_403 2 2 0.000223789
Rosa chinensis RcHm_v2.0_Chr1 2 CH_rch_581 2 2 0.000119596
Salvia bowleyana GWHASIU00000002 2 CH_sbo_334 2 2 0.000136494
Trochodendron aralioides group2 2 CH_tar_427 2 2 0.00036022
Tripterygium wilfordii NC_052232.1 2 CH_twi_280 2 2 0.000557507
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_320 2 2 0.000278772

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001