Functional clusters

Information

  • Type MapMan
  • Description Protein modification.targeting peptide maturation.endomembrane system.SPC endoplasmic signal peptidase complex.catalytic component SEC11

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB06 1 CH_bca_423 3 7 0.0000039572
Beta vulgaris Chr1_EL10_PGA_scaffold3 1 CH_bvu_225 2 2 0.000248375
Lotus japonicus chr3 1 CH_lja_108 3 5 0.0000000766976
Lactuca sativa Lsat_1_v8_lg_4 1 CH_lsa_390 2 2 0.000154202
Pisum sativum chr1LG6 1 CH_psa_278 2 2 0.00015649
Quercus lobata CM012294 1 CH_qlo_885 2 2 0.000309773
Quercus lobata 7 1 CH_qlo_886 2 2 0.000309773
Solanum tuberosum ST4.03ch12 1 CH_stu_440 2 3 0.000153732
Brassica carinata ChrB06 2 CH_bca_423 3 7 0.0000039572
Beta vulgaris Chr1_EL10_PGA_scaffold3 2 CH_bvu_225 2 2 0.000248375
Lotus japonicus chr3 2 CH_lja_108 3 5 0.0000000766976
Lactuca sativa Lsat_1_v8_lg_4 2 CH_lsa_390 2 2 0.000154202
Pisum sativum chr1LG6 2 CH_psa_278 2 2 0.00015649
Quercus lobata CM012294 2 CH_qlo_885 2 2 0.000309773
Quercus lobata 7 2 CH_qlo_886 2 2 0.000309773
Solanum tuberosum ST4.03ch12 2 CH_stu_440 2 3 0.000153732

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001