Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.mRNA quality control.NGD No-Go Decay

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Simmondsia chinensis GWHAASQ00000025 1 CH_sci_184 3 13 0.000108667
Simmondsia chinensis GWHAASQ00000025 2 CH_sci_184 3 13 0.000108667

Available child term results

Ontology identifier Description Number of clusters
17.3.3.1.1 Protein biosynthesis.mRNA quality control.NGD No-Go Decay.DOM34-HBS1 aberrant mRNA detection complex.component DOM34/LML1 19
17.3.3.2.1 Protein biosynthesis.mRNA quality control.NGD No-Go Decay.Ribosome-associated Quality Control (RQC) complex.E3 ubiquitin ligase component LTN1 4
17.3.3.2.3 Protein biosynthesis.mRNA quality control.NGD No-Go Decay.Ribosome-associated Quality Control (RQC) complex.component RQC2 24
17.3.3.3 Protein biosynthesis.mRNA quality control.NGD No-Go Decay.peptidyl-tRNA hydrolase (VMS1) 5

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001