Functional clusters
Information
- Type MapMan
- Description Protein biosynthesis.mRNA quality control.NGD No-Go Decay
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Simmondsia chinensis | GWHAASQ00000025 | 1 | CH_sci_184 | 3 | 13 | 0.000108667 |
| Simmondsia chinensis | GWHAASQ00000025 | 2 | CH_sci_184 | 3 | 13 | 0.000108667 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| 17.3.3.1.1 | Protein biosynthesis.mRNA quality control.NGD No-Go Decay.DOM34-HBS1 aberrant mRNA detection complex.component DOM34/LML1 | 19 |
| 17.3.3.2.1 | Protein biosynthesis.mRNA quality control.NGD No-Go Decay.Ribosome-associated Quality Control (RQC) complex.E3 ubiquitin ligase component LTN1 | 4 |
| 17.3.3.2.3 | Protein biosynthesis.mRNA quality control.NGD No-Go Decay.Ribosome-associated Quality Control (RQC) complex.component RQC2 | 24 |
| 17.3.3.3 | Protein biosynthesis.mRNA quality control.NGD No-Go Decay.peptidyl-tRNA hydrolase (VMS1) | 5 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |