Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.mRNA quality control.NGD No-Go Decay.Ribosome-associated Quality Control (RQC) complex.component RQC2

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group18 1 CH_ach_31 3 4 0.0000000708177
Ceratophyllum demersum 1 1 CH_cde_96 2 2 0.0000789796
Hydrangea macrophylla Hma1.2p1_0013F.1 1 CH_hma_196 2 2 0.000111086
Olea europaea scaffold452 1 CH_oeu_163 2 2 0.0000533789
Petunia axillaris Peaxi162Scf00126 1 CH_pax_192 2 2 0.0000703556
Sequoiadendron giganteum chr6 1 CH_sgi_441 3 4 0.000000014239
Solanum lycopersicum SL4.0ch01 1 CH_sly_320 2 2 0.0000586941
Solanum pennellii Spenn-ch01 1 CH_spe_274 2 2 0.000044479
Solanum tuberosum ST4.03ch01 1 CH_stu_374 2 2 0.0000512453
Utricularia gibba unitig_746 1 CH_ugi_146 2 2 0.0000734592
Vanilla planifolia CM028154.1 1 CH_vpl_166 2 2 0.000073888
Vitis vinifera chr5 1 CH_vvi_66 5 15 0.00000000000452124
Actinidia chinensis Lachesis_group18 2 CH_ach_31 3 4 0.0000000708177
Ceratophyllum demersum 1 2 CH_cde_96 2 2 0.0000789796
Hydrangea macrophylla Hma1.2p1_0013F.1 2 CH_hma_196 2 2 0.000111086
Olea europaea scaffold452 2 CH_oeu_163 2 2 0.0000533789
Petunia axillaris Peaxi162Scf00126 2 CH_pax_192 2 2 0.0000703556
Sequoiadendron giganteum chr6 2 CH_sgi_441 3 4 0.000000014239
Solanum lycopersicum SL4.0ch01 2 CH_sly_320 2 2 0.0000586941
Solanum pennellii Spenn-ch01 2 CH_spe_274 2 2 0.000044479
Solanum tuberosum ST4.03ch01 2 CH_stu_374 2 2 0.0000512453
Utricularia gibba unitig_746 2 CH_ugi_146 2 2 0.0000734592
Vanilla planifolia CM028154.1 2 CH_vpl_166 2 2 0.000073888
Vitis vinifera chr5 2 CH_vvi_66 5 15 0.00000000000452124

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001