Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.mRNA quality control.NGD No-Go Decay.DOM34-HBS1 aberrant mRNA detection complex.component DOM34/LML1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-7 1 CH_aar_148 2 2 0.0000912326
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 1 CH_arhy_148 4 5 0.00000000013282
Brassica rapa A08 1 CH_bra_263 2 2 0.000257588
Coffea canephora chr2 1 CH_ccan_191 2 6 0.0000425888
Chenopodium quinoa C_Quinoa_Scaffold_3429 1 CH_cqu_490 2 2 0.000473821
Quercus lobata 5 1 CH_qlo_628 3 19 0.0000387047
Sechium edule LG11 1 CH_sed_197 2 2 0.0000713419
Trochodendron aralioides group1 1 CH_tar_542 3 46 0.0008181
Trifolium pratense Tp57577_TGAC_v2_scaf_465 1 CH_tpr_222 2 2 0.0000756974
Aethionema arabicum LG-7 2 CH_aar_148 2 2 0.0000912326
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 2 CH_arhy_148 4 5 0.00000000013282
Brassica rapa A08 2 CH_bra_263 2 2 0.000257588
Coffea canephora chr2 2 CH_ccan_191 2 6 0.0000425888
Chenopodium quinoa C_Quinoa_Scaffold_3429 2 CH_cqu_490 2 2 0.000473821
Eucalyptus grandis Chr02 2 CH_egr_670 2 2 0.0000585274
Quercus lobata 5 2 CH_qlo_628 3 19 0.0000387047
Sechium edule LG11 2 CH_sed_197 2 2 0.0000713419
Trochodendron aralioides group1 2 CH_tar_542 3 46 0.0008181
Trifolium pratense Tp57577_TGAC_v2_scaf_465 2 CH_tpr_222 2 2 0.0000756974

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001