Functional clusters

Information

  • Type MapMan
  • Description Chromatin organisation.post-translational histone modification.histone acetylation

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC08 1 CH_bca_743 3 4 0.000177627
Malus domestica Chr17 1 CH_mdo_669 3 7 0.000493193
Brassica carinata ChrC08 2 CH_bca_743 3 4 0.000177627
Malus domestica Chr17 2 CH_mdo_669 3 7 0.000493193

Available child term results

Ontology identifier Description Number of clusters
12.3.1.1 Chromatin organisation.post-translational histone modification.histone acetylation.NuA4 histone acetyltransferase complex 2
12.3.1.1.1.1 Chromatin organisation.post-translational histone modification.histone acetylation.NuA4 histone acetyltransferase complex.Piccolo module.component EPL1 6
12.3.1.1.1.2 Chromatin organisation.post-translational histone modification.histone acetylation.NuA4 histone acetyltransferase complex.Piccolo module.component EAF6 4
12.3.1.1.1.3 Chromatin organisation.post-translational histone modification.histone acetylation.NuA4 histone acetyltransferase complex.Piccolo module.acetyltransferase component HAM 2
12.3.1.1.1.4 Chromatin organisation.post-translational histone modification.histone acetylation.NuA4 histone acetyltransferase complex.Piccolo module.methylation reader component ING1 4
12.3.1.1.2.1 Chromatin organisation.post-translational histone modification.histone acetylation.NuA4 histone acetyltransferase complex.assembly platform.platform component EAF1 22
12.3.1.1.2.2 Chromatin organisation.post-translational histone modification.histone acetylation.NuA4 histone acetyltransferase complex.assembly platform.assembly platform component TRA1 16
12.3.1.1.3.1 Chromatin organisation.post-translational histone modification.histone acetylation.NuA4 histone acetyltransferase complex.TINTIN module.component EAF7 8
12.3.1.1.3.2 Chromatin organisation.post-translational histone modification.histone acetylation.NuA4 histone acetyltransferase complex.TINTIN module.methylation reader component MRG 11
12.3.1.1.5.1 Chromatin organisation.post-translational histone modification.histone acetylation.NuA4 histone acetyltransferase complex.module shared with NuA4/SWR1 complexes.component ARP4 2
12.3.1.1.5.2 Chromatin organisation.post-translational histone modification.histone acetylation.NuA4 histone acetyltransferase complex.module shared with NuA4/SWR1 complexes.component YAF9 2
12.3.1.1.5.3 Chromatin organisation.post-translational histone modification.histone acetylation.NuA4 histone acetyltransferase complex.module shared with NuA4/SWR1 complexes.recruitment factor component SWC4 11
12.3.1.2 Chromatin organisation.post-translational histone modification.histone acetylation.histone acetyltransferase (HAC/HPCAT) 29

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001