Functional clusters

Information

  • Type MapMan
  • Description Chromatin organisation.post-translational histone modification.histone acetylation.NuA4 histone acetyltransferase complex.assembly platform.platform component EAF1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr5 1 CH_acertr_254 2 2 0.000070497
Actinidia chinensis Lachesis_group5 1 CH_ach_61 3 7 0.00000309733
Arabidopsis thaliana Chr3 1 CH_ath_296 2 4 0.00017189
Amborella trichopoda AmTr_v1.0_scaffold00045 1 CH_atr_243 2 2 0.000238322
Camellia sinensis var. sinensis Chr4 1 CH_camsi_639 2 2 0.000137564
Capsella rubella scaffold_3 1 CH_cru_301 2 3 0.000219338
Daucus carota DCARv2_Chr3 1 CH_dca_350 2 2 0.000382665
Oryza sativa ssp. japonica chr05 1 CH_osa_261 2 2 0.000158437
Physcomitrium patens Chr26 1 CH_ppa_18 4 14 0.0000000103548
Vanilla planifolia CM028150.1 1 CH_vpl_87 3 11 0.00000540224
Zea mays 3 1 CH_zma_188 2 2 0.000153394
Acer truncatum chr5 2 CH_acertr_254 2 2 0.000070497
Actinidia chinensis Lachesis_group5 2 CH_ach_61 3 7 0.00000309733
Arabidopsis thaliana Chr3 2 CH_ath_296 2 4 0.00017189
Amborella trichopoda AmTr_v1.0_scaffold00045 2 CH_atr_243 2 2 0.000238322
Camellia sinensis var. sinensis Chr4 2 CH_camsi_639 2 2 0.000137564
Capsella rubella scaffold_3 2 CH_cru_301 2 3 0.000219338
Daucus carota DCARv2_Chr3 2 CH_dca_350 2 2 0.000382665
Oryza sativa ssp. japonica chr05 2 CH_osa_261 2 2 0.000158437
Physcomitrium patens Chr26 2 CH_ppa_18 4 14 0.0000000103548
Vanilla planifolia CM028150.1 2 CH_vpl_87 3 11 0.00000540224
Zea mays 3 2 CH_zma_188 2 2 0.000153394

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001