Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p28070 Brassica napus
Aa31LG4G16670 Aethionema arabicum
Actinidia04979 Actinidia chinensis
Actinidia33054 Actinidia chinensis
Ah.04g152470 Amaranthus hybridus
AL6G45300 Arabidopsis lyrata
Aqoxy3G03044 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EY3TKV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U1YD0R Arachis hypogaea
AT4G11130 Arabidopsis thaliana
ATR1149G073 Amborella trichopoda
Atru.chr9.2434 Acer truncatum
AUR62008243 Chenopodium quinoa
AUR62030995 Chenopodium quinoa
BcaB01g01590 Brassica carinata
BcaC04g21111 Brassica carinata
BolC9t56395H Brassica oleracea
BraA09t38373Z Brassica rapa
C09p35570 Brassica napus
CAN.G781.32 Capsicum annuum
CANSAT80G0502 Cannabis sativa
CARHR255450 Cardamine hirsuta
Carub.0006s2995 Capsella rubella
Ca_21903_v3 Cicer arietinum L.
Ca_21921_v3 Cicer arietinum L.
Cc00_g08850 Coffea canephora
CDE02G1996 Ceratophyllum demersum
Cfa019089 Carpinus fangiana
CiPaw.11G029600 Carya illinoinensis
ClCG06G016860 Citrullus lanatus
COL.COLO4_34068 Corchorus olitorius
Cpa.g.sc124.30 Carica papaya
CsaV3_1G001660 Cucumis sativus L.
CSS0007403 Camellia sinensis var. sinensis
DCAR_023950 Daucus carota
DCAR_031305 Daucus carota
Dinv20678 Davidia involucrata
Duzib205G0763 Durio zibethinus
ECA232G1651 Erigeron canadensis
EL10Ac5g10792 Beta vulgaris
Eucgr.K02861 Eucalyptus grandis
FAN04G0400 Fragaria x ananassa
FAN08G1414 Fragaria x ananassa
FAN13G1371 Fragaria x ananassa
FAN18G3945 Fragaria x ananassa
FAN18G3973 Fragaria x ananassa
FvH4_5g05070 Fragaria vesca
Glyma.05G035900 Glycine max
Glyma.17G091500 Glycine max
Gohir.A12G275700 Gossypium hirsutum
Gohir.D12G276400 Gossypium hirsutum
Gorai.008G296900 Gossypium raimondii
GSVIVG01007792001 Vitis vinifera
HanXRQChr16g0503651 Helianthus annuus
Haze_07486 Corylus avellana
Hma1.2p1_0701F.1_g205990 Hydrangea macrophylla
HPP92_018292 Vanilla planifolia
Hund09422 Selenicereus undatus
Lalb_Chr12g0201531 Lupinus albus
Lj4g0017878 Lotus japonicus
Lj5A122T98 Lonicera japonica
Lsat_1_v5_gn_4_73020 Lactuca sativa
Manes.14G068000 Manihot esculenta
MBI14_g02281_MAGBIO Magnolia biondii
MD14G1184000 Malus domestica
MD14G1184100 Malus domestica
Medtr4g106660 Medicago truncatula
MELO3C017106.2 Cucumis melo
Migut.I00038 Erythranthe guttata
MSTRG.23107 Avicennia marina
Nitab4.5_0006831g0030 Nicotiana tabacum
Nitab4.5_0010542g0010 Nicotiana tabacum
Nn4g22842 Nelumbo nucifera
Nn4g22847 Nelumbo nucifera
Oeu016355.1 Olea europaea
Os04g0465700 Oryza sativa ssp. japonica
Peaxi162Scf00017g02624 Petunia axillaris
PGR044G0950 Punica granatum
Phvul.003G198500 Phaseolus vulgaris
Potri.015G073700 Populus trichocarpa
Prupe.5G176700 Prunus persica
Psat4g057120 Pisum sativum
PSO063G4159 Papaver somniferum
PSO832G2883 Papaver somniferum
QL05p078037 Quercus lobata
QL05p078041 Quercus lobata
QL05p078063 Quercus lobata
QL05p078281 Quercus lobata
QL10p013638 Quercus lobata
RcHm_v2.0_Chr7g0193931 Rosa chinensis
Sabra15G0097800 Salix brachista
SalBow5G4870 Salvia bowleyana
Sc12g0005440 Simmondsia chinensis
Sed0009148 Sechium edule
SEGI_01907 Sequoiadendron giganteum
SGA_v2.0_scaffold19G08734 Striga asiatica
SGA_v2.0_scaffold90G27978 Striga asiatica
SHI07894 Sapria himalayana
SHI07897 Sapria himalayana
SMO331G0006 Selaginella moellendorffii
Solyc03g114140.3 Solanum lycopersicum
Sopen03g033200 Solanum pennellii
Sp6g06280 Schrenkiella parvula
TAR371G0623 Trochodendron aralioides
TAR371G1196 Trochodendron aralioides
TAR371G1197 Trochodendron aralioides
TAR371G1206 Trochodendron aralioides
THA.LOC104818229 Tarenaya hassleriana
Thecc.03G008200 Theobroma cacao
Thecc.04G148700 Theobroma cacao
Thhalv10028370m.g Eutrema salsugineum
TPR.G37480 Trifolium pratense
TPR.G37512 Trifolium pratense
TWI15G0279 Tripterygium wilfordii
unitig_750.g28475 Utricularia gibba
unitig_750.g28476 Utricularia gibba
vmacro19370 Vaccinium macrocarpon
VMungo1215G0673 Vigna mungo
Zm00001eb080370 Zea mays

User provided reference genes

Program Settings