Gene: TPR.G37480
General Information
Structural Information
- Species Trifolium pratense
- Gene Identifier TPR.G37480
- Transcript Identifier TPR.T38737
- Gene Type Coding gene
- Location Tp57577_TGAC_v2_LG5 : 7767214-7771806 : negative
Gene Family Information
- ID HOM05D000822
- #Genes/#Species 723/96
- Phylogenetic origin
- ID ORTHO05D008442
- #Genes/#Species 119/90
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Tp57577_TGAC_v2_mRNA38737.v2
- id Tp57577_TGAC_v2_gene37480.v2
- pacid 35983761
- uniprot A0A2K3MHN9
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016458 | ISO | PLAZA Integrative Orthology | gene silencing | AT4G11130 |
| GO:0050832 | ISO | PLAZA Integrative Orthology | defense response to fungus | AT4G11130 |
| GO:0030422 | ISO | PLAZA Integrative Orthology | production of siRNA involved in RNA interference | AT4G11130 |
| GO:0009751 | ISO | PLAZA Integrative Orthology | response to salicylic acid | AT4G11130 |
| GO:0070919 | ISO | PLAZA Integrative Orthology | production of siRNA involved in chromatin silencing by small RNA | AT4G11130 |
| GO:0010495 | ISO | PLAZA Integrative Orthology | long-distance posttranscriptional gene silencing | AT4G11130 |
| GO:0031047 | IEA | GOA Database | gene silencing by RNA | |
| GO:0001172 | IEA | GOA Database | transcription, RNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G11130 |
| GO:0003968 | IEA | GOA Database | RNA-directed 5'-3' RNA polymerase activity | |
| GO:0003968 | IEA | InterPro | RNA-directed 5'-3' RNA polymerase activity | |
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0003723 | IEA | GOA Database | RNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT4G11130 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT4G11130 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.5.1.9 | Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.ssRNA polymerase (RDR2) |