Gene: FAN08G1414

General Information

Structural Information

  • Species Fragaria x ananassa
  • Gene Identifier FAN08G1414
  • Transcript Identifier FAN08G1414.1
  • Gene Type Coding gene
  • Location Fvb5-3 : 24768788-24772764 : negative

Gene Family Information

  • ID HOM05D000822
  • #Genes/#Species 723/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id maker-Fvb5-3-augustus-gene-247.54.v1.0.a1
  • pacid 50461143

Descriptions

  • Description PTHR23079//PTHR23079:SF5 - RNA-DEPENDENT RNA POLYMERASE // RNA-DEPENDENT RNA POLYMERASE 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016458
ISO
PLAZA Integrative Orthologygene silencing AT4G11130
GO:0010495
ISO
PLAZA Integrative Orthologylong-distance posttranscriptional gene silencing AT4G11130
GO:0070919
ISO
PLAZA Integrative Orthologyproduction of siRNA involved in chromatin silencing by small RNA AT4G11130
GO:0031047
ISO
PLAZA Integrative Orthologygene silencing by RNA Solyc03g114140.3
GO:0009751
ISO
PLAZA Integrative Orthologyresponse to salicylic acid AT4G11130
GO:0030422
ISO
PLAZA Integrative Orthologyproduction of siRNA involved in RNA interference AT4G11130
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT4G11130

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003968
IEA
InterProRNA-directed 5'-3' RNA polymerase activity
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G11130

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G11130
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT4G11130

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007855 RNA-dependent RNA polymerase, eukaryotic-type
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
Mapman id Description
12.5.1.9 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.ssRNA polymerase (RDR2)