Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p11560 Brassica napus
Aa31sc262G10 Aethionema arabicum
Actinidia25762 Actinidia chinensis
Ah.03g133840 Amaranthus hybridus
AL1G41360 Arabidopsis lyrata
Aqoxy5G03513 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9VK01Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L7S9V2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZECH1J Arachis hypogaea
AT1G27880 Arabidopsis thaliana
ATR0824G260 Amborella trichopoda
Atru.chr11.2248 Acer truncatum
Atru.chr11.2263 Acer truncatum
AUR62005572 Chenopodium quinoa
AUR62024158 Chenopodium quinoa
BcaB03g13967 Brassica carinata
BcaC06g35322 Brassica carinata
BolC7t42249H Brassica oleracea
BraA07t28944Z Brassica rapa
C07p17440 Brassica napus
CAN.G524.28 Capsicum annuum
CAN.G692.4 Capsicum annuum
CAN.G692.6 Capsicum annuum
CARHR027560 Cardamine hirsuta
Carub.0001s2633 Capsella rubella
Ca_18064_v3 Cicer arietinum L.
CBR_g3709 Chara braunii
Cc11_g16610 Coffea canephora
Cfa009315 Carpinus fangiana
Ciclev10030662m.g Citrus clementina
CiPaw.05G115000 Carya illinoinensis
ClCG11G013890 Citrullus lanatus
Cpa.g.c26951.4 Carica papaya
Cpa.g.sc351.1 Carica papaya
Cpa.g.sc43.36 Carica papaya
Cpa.g.sc43.37 Carica papaya
Cpa.g.sc43.38 Carica papaya
Cpa.g.sc43.40 Carica papaya
CsaV3_5G030500 Cucumis sativus L.
CSS0031830 Camellia sinensis var. sinensis
DCAR_031182 Daucus carota
Dinv14802 Davidia involucrata
Duzib251G0641 Durio zibethinus
ECA234G2532 Erigeron canadensis
EL10Ac6g13439 Beta vulgaris
Eucgr.B03462 Eucalyptus grandis
FAN07G2267 Fragaria x ananassa
FAN12G3886 Fragaria x ananassa
FAN17G1269 Fragaria x ananassa
FAN22G1025 Fragaria x ananassa
FvH4_4g24310 Fragaria vesca
Glyma.05G145500 Glycine max
Glyma.08G102300 Glycine max
Gohir.A01G156200 Gossypium hirsutum
Gohir.D01G154200 Gossypium hirsutum
Gorai.002G190800 Gossypium raimondii
GSVIVG01010342001 Vitis vinifera
HanXRQChr10g0299791 Helianthus annuus
HanXRQChr12g0355541 Helianthus annuus
HanXRQChr12g0385911 Helianthus annuus
Haze_12369 Corylus avellana
Hma1.2p1_1340F.1_g276760 Hydrangea macrophylla
Hma1.2p1_1340F.1_g276770 Hydrangea macrophylla
HPP92_008108 Vanilla planifolia
HPP92_008127 Vanilla planifolia
Hund25439 Selenicereus undatus
Lalb_Chr12g0206361 Lupinus albus
Lj4g0022914 Lotus japonicus
Lj6C822G18 Lonicera japonica
Lsat_1_v5_gn_4_2880 Lactuca sativa
Manes.13G015900 Manihot esculenta
Mapoly0097s0064 Marchantia polymorpha
MBI08_g29122_MAGBIO Magnolia biondii
MCO05G045 Micromonas commoda
MD16G1111900 Malus domestica
Medtr8g080160 Medicago truncatula
MELO3C011889.2 Cucumis melo
Migut.K00698 Erythranthe guttata
MSTRG.7982 Avicennia marina
Nitab4.5_0000240g0090 Nicotiana tabacum
Nitab4.5_0011772g0040 Nicotiana tabacum
Nn4g22403 Nelumbo nucifera
Oeu041679.1 Olea europaea
Os04g0486800 Oryza sativa ssp. japonica
Peaxi162Scf00128g00937 Petunia axillaris
PGR102G1013 Punica granatum
Phvul.002G176000 Phaseolus vulgaris
Potri.010G056500 Populus trichocarpa
Pp3c11_4840 Physcomitrium patens
PRCOL_00002614 Prasinoderma coloniale
Prupe.1G233100 Prunus persica
Psat7g079560 Pisum sativum
PSO063G0842 Papaver somniferum
PSO782G1321 Papaver somniferum
QL03p054717 Quercus lobata
RcHm_v2.0_Chr4g0431111 Rosa chinensis
Rhsim12G0105200 Rhododendron simsii
Sabra10G0048600 Salix brachista
Sc04g0005060 Simmondsia chinensis
Sed0026556 Sechium edule
SEGI_03362 Sequoiadendron giganteum
SEGI_24083 Sequoiadendron giganteum
SEGI_35750 Sequoiadendron giganteum
SEGI_39158 Sequoiadendron giganteum
SGA_v2.0_scaffold100G29590 Striga asiatica
SHI17940 Sapria himalayana
SMO118G0075 Selaginella moellendorffii
Solyc05g014690.3 Solanum lycopersicum
Sopen05g009850 Solanum pennellii
Sp1g24070 Schrenkiella parvula
TAR629G2337 Trochodendron aralioides
THA.LOC104820520 Tarenaya hassleriana
Thecc.02G274400 Theobroma cacao
Thhalv10006736m.g Eutrema salsugineum
TPR.G17092 Trifolium pratense
TWI36G1065 Tripterygium wilfordii
unitig_22.g6411 Utricularia gibba
vmacro16133 Vaccinium macrocarpon
VMungo0251G2810 Vigna mungo
Zm00001eb425250 Zea mays

User provided reference genes

Program Settings