Gene: Solyc05g014690.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g014690.3
  • Transcript Identifier Solyc05g014690.3.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 8875108-8885061 : positive

Gene Family Information

  • ID HOM05D000246
  • #Genes/#Species 1713/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g014690.3.1
  • uniprot A0A3Q7GI28
  • gene_id Solyc05g014690

Descriptions

  • Description RNA helicase DEAH-box14
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006310
IBA
IEA
GOA DatabaseDNA recombination
GO:0006310
IEA
InterProDNA recombination
GO:0042631
ISO
PLAZA Integrative Orthologycellular response to water deprivation AT1G27880
GO:0000724
IBA
GOA Databasedouble-strand break repair via homologous recombination
GO:0032508
IBA
GOA DatabaseDNA duplex unwinding
GO:0006281
IBA
GOA DatabaseDNA repair
GO:0006268
IBA
GOA DatabaseDNA unwinding involved in DNA replication
GO:0016070
IDA
Gene OntologyRNA metabolic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043138
IBA
GOA Database3'-5' DNA helicase activity
GO:0009378
IBA
GOA Databasefour-way junction helicase activity
GO:0003724
IDA
Gene OntologyRNA helicase activity1
GO:0004386
IEA
GOA Databasehelicase activity
GO:0004386
IEA
InterProhelicase activity
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0005737
IBA
GOA Databasecytoplasm
GO:0005694
IBA
GOA Databasechromosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR011545 DEAD/DEAH box helicase domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
IPR004589 DNA helicase, ATP-dependent, RecQ type
Mapman id Description
35.1 not assigned.annotated