Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p37400 Brassica napus
A10p01850 Brassica napus
Aa31LG1G9220 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.482 Anthoceros agrestis
Actinidia21100 Actinidia chinensis
Actinidia21101 Actinidia chinensis
Ah.07g204130 Amaranthus hybridus
AL1G12820 Arabidopsis lyrata
Aqoxy2G03248 Aquilegia oxysepala
AT1G03310 Arabidopsis thaliana
ATR0171G036 Amborella trichopoda
Atru.chr5.1362 Acer truncatum
AUR62002608 Chenopodium quinoa
AUR62030031 Chenopodium quinoa
BcaC05g24545 Brassica carinata
BcaC05g24547 Brassica carinata
BcaC05g24643 Brassica carinata
BcaC07g36972 Brassica carinata
BcaNung07279 Brassica carinata
BolC5t28961H Brassica oleracea
BolC8t46852H Brassica oleracea
BraA08t35637Z Brassica rapa
BraA10t42459Z Brassica rapa
C05p01830 Brassica napus
C08p00520 Brassica napus
CAN.G79.69 Capsicum annuum
CAN.G962.5 Capsicum annuum
CANSAT80G1415 Cannabis sativa
CARHR002620 Cardamine hirsuta
CARHR005920 Cardamine hirsuta
Carub.0001s0242 Capsella rubella
Ca_08568_v3 Cicer arietinum L.
CBR_g22242 Chara braunii
Cc08_g00630 Coffea canephora
CDE02G1450 Ceratophyllum demersum
Cfa006105 Carpinus fangiana
Ciclev10023436m.g Citrus clementina
CiPaw.08G103200 Carya illinoinensis
ClCG09G006860 Citrullus lanatus
COL.COLO4_09141 Corchorus olitorius
Cpa.g.sc485.4 Carica papaya
Cre17.g698850 Chlamydomonas reinhardtii
CsaV3_7G028580 Cucumis sativus L.
CSS0035433 Camellia sinensis var. sinensis
CSS0044600 Camellia sinensis var. sinensis
DCAR_002753 Daucus carota
Duzib133G0154 Durio zibethinus
Duzib138G1494 Durio zibethinus
ECA247G0901 Erigeron canadensis
EL10Ac3g06307 Beta vulgaris
Eucgr.K03392 Eucalyptus grandis
FAN15G0060 Fragaria x ananassa
FAN20G1656 Fragaria x ananassa
FAN24G3460 Fragaria x ananassa
FAN27G1002 Fragaria x ananassa
FvH4_2g23950 Fragaria vesca
FvH4_2g23951 Fragaria vesca
Glyma.03G151200 Glycine max
Glyma.19G153700 Glycine max
Gohir.A11G120800 Gossypium hirsutum
Gohir.D11G125900 Gossypium hirsutum
Gohir.D13G211742 Gossypium hirsutum
Gorai.007G134600 Gossypium raimondii
GSVIVG01011096001 Vitis vinifera
HanXRQChr15g0466461 Helianthus annuus
Haze_04745 Corylus avellana
Hma1.2p1_0257F.1_g103780 Hydrangea macrophylla
HPP92_013798 Vanilla planifolia
Hund18056 Selenicereus undatus
Lj1g0013086 Lotus japonicus
Lj2P1178T14 Lonicera japonica
Lsat_1_v5_gn_9_4440 Lactuca sativa
Manes.05G073400 Manihot esculenta
Mapoly0105s0013 Marchantia polymorpha
MBI17_g12003_MAGBIO Magnolia biondii
MD03G1268800 Malus domestica
MD11G1289600 Malus domestica
Medtr7g094560 Medicago truncatula
MELO3C015861.2 Cucumis melo
Migut.N00854 Erythranthe guttata
MSTRG.5199 Avicennia marina
Nitab4.5_0006180g0010 Nicotiana tabacum
Nitab4.5_0007392g0010 Nicotiana tabacum
Nn4g26174 Nelumbo nucifera
Oeu000145.1 Olea europaea
Os05g0393700 Oryza sativa ssp. japonica
Peaxi162Scf00104g00022 Petunia axillaris
PGR044G0834 Punica granatum
PGSC0003DMG400000954 Solanum tuberosum
Phvul.001G148700 Phaseolus vulgaris
Phvul.005G040300 Phaseolus vulgaris
Potri.002G219900 Populus trichocarpa
Pp3c8_12820 Physcomitrium patens
Prupe.8G244800 Prunus persica
Psat3g063520 Pisum sativum
Psat3g126200 Pisum sativum
Psat4g161960 Pisum sativum
PSO170G4311 Papaver somniferum
PSO407G0091 Papaver somniferum
QL12p022621 Quercus lobata
RcHm_v2.0_Chr6g0291581 Rosa chinensis
Rhsim01G0276100 Rhododendron simsii
Sabra02G0167800 Salix brachista
SalBow1G2928 Salvia bowleyana
SalBow1G6883 Salvia bowleyana
SalBow1G8524 Salvia bowleyana
Sc06g0006960 Simmondsia chinensis
Sed0000979 Sechium edule
SEGI_11733 Sequoiadendron giganteum
SEGI_24667 Sequoiadendron giganteum
SEGI_30223 Sequoiadendron giganteum
SGA_v2.0_scaffold8G04456 Striga asiatica
SMO143G0219 Selaginella moellendorffii
Solyc09g064800.3 Solanum lycopersicum
Sopen09g026500 Solanum pennellii
Sp1g02300 Schrenkiella parvula
TAR362G0069 Trochodendron aralioides
THA.LOC104801221 Tarenaya hassleriana
Thecc.01G283700 Theobroma cacao
Thhalv10006762m.g Eutrema salsugineum
TPR.G18118 Trifolium pratense
TPR.G39641 Trifolium pratense
TWI59G0008 Tripterygium wilfordii
unitig_747.g21274 Utricularia gibba
vmacro14935 Vaccinium macrocarpon
VMungo1383G3283 Vigna mungo
Zm00001eb287400 Zea mays

User provided reference genes

Program Settings