Gene: FvH4_2g23950

General Information

Structural Information

  • Species Fragaria vesca
  • Gene Identifier FvH4_2g23950
  • Transcript Identifier FvH4_2g23950.t1
  • Gene Type Coding gene
  • Location Fvb2 : 19571841-19573181 : positive

Gene Family Information

  • ID HOM05D001026
  • #Genes/#Species 592/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id FvH4_2g23950.v4.0.a2
  • pacid 50661833

Descriptions

  • Description 3.2.1.68 - Isoamylase / Debranching enzyme
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019252
IEA
InterProstarch biosynthetic process
GO:0005975
ISO
PLAZA Homology (enrichment)carbohydrate metabolic process HOM05D001026
GO:0005977
ISO
PLAZA Integrative Orthologyglycogen metabolic process AT1G03310
GO:0010021
ISO
PLAZA Integrative Orthologyamylopectin biosynthetic process AT1G03310
GO:0005983
ISO
PLAZA Integrative Orthologystarch catabolic process Os05g0393700

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019156
IEA
InterProisoamylase activity
GO:0003824
ISO
PLAZA Homology (enrichment)catalytic activity HOM05D001026
GO:0004553
ISO
PLAZA Homology (enrichment)hydrolase activity, hydrolyzing O-glycosyl compounds HOM05D001026

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G03310
GO:0043033
ISO
PLAZA Integrative Orthologyisoamylase complex Os05g0393700

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013780 Glycosyl hydrolase, all-beta
IPR017853 Glycoside hydrolase superfamily
IPR044096 Isoamylase 2, catalytic domain
Mapman id Description
3.2.2.6.2 Carbohydrate metabolism.starch metabolism.biosynthesis.ISA1-ISA2 isoamylase-type starch debranching complex.component ISA2