Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p05250 Brassica napus
Aa31LG1G26800 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1161 Anthoceros agrestis
Actinidia12246 Actinidia chinensis
Ah.05g176650 Amaranthus hybridus
AL4G44370 Arabidopsis lyrata
Aqoxy7G00665 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4QW6M0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J20DWG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M89JWR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z7MJ9S Arachis hypogaea
AT2G45270 Arabidopsis thaliana
ATR0757G194 Amborella trichopoda
Atru.chr5.287 Acer truncatum
AUR62004192 Chenopodium quinoa
AUR62013652 Chenopodium quinoa
AUR62025959 Chenopodium quinoa
BcaB02g08945 Brassica carinata
BcaB02g08946 Brassica carinata
BcaC01g05144 Brassica carinata
BcaC02g12086 Brassica carinata
BcaC02g12231 Brassica carinata
BolC4t22243H Brassica oleracea
BraA05t19495Z Brassica rapa
C04p06180 Brassica napus
C04p08020 Brassica napus
CAN.G295.11 Capsicum annuum
CANSAT56G2357 Cannabis sativa
CARHR140480 Cardamine hirsuta
Carub.0004s2787 Capsella rubella
Ca_19945_v3 Cicer arietinum L.
Cc02_g24090 Coffea canephora
CDE11G1124 Ceratophyllum demersum
Ciclev10021173m.g Citrus clementina
CiPaw.01G263800 Carya illinoinensis
ClCG05G002370 Citrullus lanatus
COL.COLO4_12526 Corchorus olitorius
Cpa.g.sc18.102 Carica papaya
Cre14.g615500 Chlamydomonas reinhardtii
Cre15.g639400 Chlamydomonas reinhardtii
CsaV3_3G009810 Cucumis sativus L.
CSS0010588 Camellia sinensis var. sinensis
CSS0024830 Camellia sinensis var. sinensis
DCAR_002088 Daucus carota
Dinv32366 Davidia involucrata
Dinv43691 Davidia involucrata
Duzib133G0079 Durio zibethinus
ECA234G2802 Erigeron canadensis
EL10Ac1g00871 Beta vulgaris
EL10Ac9g20646 Beta vulgaris
Eucgr.E01449 Eucalyptus grandis
FAN01G2666 Fragaria x ananassa
FAN03G0203 Fragaria x ananassa
FAN06G2192 Fragaria x ananassa
FAN06G3216 Fragaria x ananassa
FAN10G2689 Fragaria x ananassa
FAN10G2758 Fragaria x ananassa
FvH4_7g11490 Fragaria vesca
Glyma.01G140002 Glycine max
Glyma.03G027900 Glycine max
Gohir.A08G135800 Gossypium hirsutum
Gohir.D08G156600 Gossypium hirsutum
Gorai.004G162900 Gossypium raimondii
GSVIVG01027664001 Vitis vinifera
HanXRQChr16g0519981 Helianthus annuus
Haze_16794 Corylus avellana
HPP92_000383 Vanilla planifolia
Hund17031 Selenicereus undatus
Lalb_Chr07g0189951 Lupinus albus
Lj3g0016597 Lotus japonicus
Lj7C531T10 Lonicera japonica
Lsat_1_v5_gn_4_43120 Lactuca sativa
Manes.01G266900 Manihot esculenta
Mapoly0019s0039 Marchantia polymorpha
MBI04_g44162_MAGBIO Magnolia biondii
MBI12_g18799_MAGBIO Magnolia biondii
MCO07G252 Micromonas commoda
MD02G1206900 Malus domestica
Medtr4g024920 Medicago truncatula
MELO3C006202.2 Cucumis melo
Migut.B01618 Erythranthe guttata
MSTRG.20738 Avicennia marina
Nitab4.5_0001329g0140 Nicotiana tabacum
Nitab4.5_0003912g0080 Nicotiana tabacum
Nn1g01133 Nelumbo nucifera
Oeu055503.2 Olea europaea
Os01g0295900 Oryza sativa ssp. japonica
Os12g0485000 Oryza sativa ssp. japonica
Peaxi162Scf00959g00124 Petunia axillaris
PGR042G1853 Punica granatum
PGSC0003DMG401007021 Solanum tuberosum
Phvul.010G081700 Phaseolus vulgaris
Potri.014G067800 Populus trichocarpa
Pp3c15_10750 Physcomitrium patens
PRCOL_00001708 Prasinoderma coloniale
Prupe.2G143300 Prunus persica
Psat0s3070g0040 Pisum sativum
PSO478G3019 Papaver somniferum
PSO782G1940 Papaver somniferum
QL08p052809 Quercus lobata
RcHm_v2.0_Chr1g0349791 Rosa chinensis
RcHm_v2.0_Chr1g0349801 Rosa chinensis
RcHm_v2.0_Chr1g0349851 Rosa chinensis
RcHm_v2.0_Chr1g0349871 Rosa chinensis
RcHm_v2.0_Chr1g0349931 Rosa chinensis
Sabra14G0047700 Salix brachista
SalBow5G4090 Salvia bowleyana
Sc02g0002650 Simmondsia chinensis
Sed0021448 Sechium edule
Sed0024444 Sechium edule
SEGI_07028 Sequoiadendron giganteum
SEGI_12424 Sequoiadendron giganteum
SGA_v2.0_scaffold95G28910 Striga asiatica
SMO271G0013 Selaginella moellendorffii
Solyc05g050940.4 Solanum lycopersicum
Sopen05g029410 Solanum pennellii
Sp4g27290 Schrenkiella parvula
SpUn0031_0030 Schrenkiella parvula
TAR374G0513 Trochodendron aralioides
TAR374G1545 Trochodendron aralioides
TAR375G0004 Trochodendron aralioides
THA.LOC104817237 Tarenaya hassleriana
Thecc.01G378900 Theobroma cacao
Thhalv10001427m.g Eutrema salsugineum
TPR.G7589 Trifolium pratense
TWI14G0369 Tripterygium wilfordii
unitig_37.g12896 Utricularia gibba
vmacro13416 Vaccinium macrocarpon
VMungo0331G1483 Vigna mungo
Zm00001eb129920 Zea mays

User provided reference genes

Program Settings