Gene: Solyc05g050940.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g050940.4
  • Transcript Identifier Solyc05g050940.4.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 60555787-60562758 : positive

Gene Family Information

  • ID HOM05D005501
  • #Genes/#Species 139/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g050940.4.1
  • uniprot A0A3Q7HEY8
  • gene_id Solyc05g050940

Descriptions

  • Description tRNA N6-adenosine threonylcarbamoyltransferase (AHRD V3.3 *** A0A248JMK1_9PROT)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0002949
IEA
GOA DatabasetRNA threonylcarbamoyladenosine modification
GO:0002949
IEA
InterProtRNA threonylcarbamoyladenosine modification
GO:0008033
IEA
GOA DatabasetRNA processing
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT2G45270

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016747
IEA
GOA Databaseacyltransferase activity, transferring groups other than amino-acyl groups
GO:0061711
IEA
GOA DatabaseN(6)-L-threonylcarbamoyladenine synthase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016746
IEA
GOA Databaseacyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
IBA
IEA
GOA Databasemitochondrion
GO:0005743
ISO
PLAZA Integrative Orthologymitochondrial inner membrane AT2G45270

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017861 Kae1/TsaD family
IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD
IPR000905 Gcp-like domain
IPR043129 ATPase, nucleotide binding domain
Mapman id Description
16.5.2.3 RNA processing.RNA modification.N6-threonylcarbamoylation.mitochondrial tRNA threonylcarbamoyl transferase