Gene: Sopen05g029410

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g029410
  • Transcript Identifier Sopen05g029410.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 73038112-73052911 : positive

Gene Family Information

  • ID HOM05D005501
  • #Genes/#Species 139/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g029410.1

Descriptions

  • Description Mitochondrial protein essential for embryo development. | glycoprotease 1 (GCP1) | FUNCTIONS IN: metalloendopeptidase activity | INVOLVED IN: proteolysis, embryo development | LOCATED IN: mitochondrial inner membrane | EXPRESSED IN: 11 plant structures | EXPRESSED DURING: 7 growth stages | CONTAINS InterPro DOMAIN/s: Peptidase M22, O-sialoglycoprotein peptidase , Peptidase M22, glycoprotease , Peptidase M22, glycoprotease, subgroup | BEST Arabidopsis thaliana protein match is: Actin-like ATPase superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0002949
IEA
InterProtRNA threonylcarbamoyladenosine modification
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT2G45270

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005743
ISO
PLAZA Integrative Orthologymitochondrial inner membrane AT2G45270

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000905 Gcp-like domain
IPR017861 Kae1/TsaD family
IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD
IPR043129 ATPase, nucleotide binding domain
Mapman id Description
16.5.2.3 RNA processing.RNA modification.N6-threonylcarbamoylation.mitochondrial tRNA threonylcarbamoyl transferase