Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p29810 Brassica napus
A06p46030 Brassica napus
Aa31LG9G6610 Aethionema arabicum
Actinidia16720 Actinidia chinensis
Ah.09g232710 Amaranthus hybridus
AL8G12180 Arabidopsis lyrata
Aqoxy1G01748 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7J68PP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I8W9P3 Arachis hypogaea
AT5G46280 Arabidopsis thaliana
ATR0693G231 Amborella trichopoda
Atru.chr10.1290 Acer truncatum
Atru.chr10.1316 Acer truncatum
AUR62027610 Chenopodium quinoa
AUR62030235 Chenopodium quinoa
BcaC03g16842 Brassica carinata
BcaC06g31485 Brassica carinata
BolC2t10766H Brassica oleracea
BolC7t43499H Brassica oleracea
BraA02t08002Z Brassica rapa
BraA06t27467Z Brassica rapa
C02p47220 Brassica napus
C07p29500 Brassica napus
CAN.G650.47 Capsicum annuum
CANSAT35G0708 Cannabis sativa
CARHR175520 Cardamine hirsuta
Carub.0008s0163 Capsella rubella
Ca_18269_v3 Cicer arietinum L.
CBR_g40405 Chara braunii
Cc00_g11120 Coffea canephora
Cc08_g06660 Coffea canephora
Cc09_g02220 Coffea canephora
CDE02G1644 Ceratophyllum demersum
CDE02G2269 Ceratophyllum demersum
Ciclev10017750m.g Citrus clementina
CiPaw.10G092900 Carya illinoinensis
ClCG01G024510 Citrullus lanatus
COL.COLO4_38291 Corchorus olitorius
Cpa.g.sc166.27 Carica papaya
Cre06.g295700 Chlamydomonas reinhardtii
CsaV3_6G051630 Cucumis sativus L.
CSS0047698 Camellia sinensis var. sinensis
DCAR_005114 Daucus carota
DCAR_027944 Daucus carota
Dinv32273 Davidia involucrata
Duzib160G0935 Durio zibethinus
Duzib192G0960 Durio zibethinus
ECA236G2001 Erigeron canadensis
EL10As10g23969 Beta vulgaris
Eucgr.E02391 Eucalyptus grandis
FAN11G2321 Fragaria x ananassa
FAN16G3703 Fragaria x ananassa
FAN21G3930 Fragaria x ananassa
FAN25G1702 Fragaria x ananassa
FvH4_3g05860 Fragaria vesca
Glyma.05G129700 Glycine max
Glyma.08G084400 Glycine max
Gohir.A05G149600 Gossypium hirsutum
Gohir.A10G039500 Gossypium hirsutum
Gohir.D05G152200 Gossypium hirsutum
Gohir.D10G040300 Gossypium hirsutum
Gorai.009G156300 Gossypium raimondii
Gorai.011G042400 Gossypium raimondii
GSVIVG01021426001 Vitis vinifera
HanXRQChr04g0118381 Helianthus annuus
Haze_05571 Corylus avellana
Haze_26097 Corylus avellana
Hma1.2p1_0259F.1_g104280 Hydrangea macrophylla
Hund21521 Selenicereus undatus
Lalb_Chr07g0188661 Lupinus albus
Lj1A1185G63 Lonicera japonica
Lj4g0014780 Lotus japonicus
Lj4g0025504 Lotus japonicus
Lsat_1_v5_gn_7_30521 Lactuca sativa
Manes.15G120100 Manihot esculenta
Manes.17G068400 Manihot esculenta
Mapoly0001s0105 Marchantia polymorpha
MBI10_g21116_MAGBIO Magnolia biondii
MCO01G199 Micromonas commoda
MD05G1286600 Malus domestica
MD10G1264100 Malus domestica
Medtr4g096700 Medicago truncatula
MELO3C007144.2 Cucumis melo
Migut.H01371 Erythranthe guttata
MSTRG.14768 Avicennia marina
Nitab4.5_0001040g0140 Nicotiana tabacum
Nitab4.5_0018875g0010 Nicotiana tabacum
Nn3g20692 Nelumbo nucifera
Oeu052381.3 Olea europaea
Os05g0173700 Oryza sativa ssp. japonica
Os05g0476200 Oryza sativa ssp. japonica
Peaxi162Scf00796g00120 Petunia axillaris
PGR042G0058 Punica granatum
PGSC0003DMG400008308 Solanum tuberosum
Phvul.002G194200 Phaseolus vulgaris
Potri.004G131600 Populus trichocarpa
Pp3c20_6190 Physcomitrium patens
PRCOL_00006492 Prasinoderma coloniale
Prupe.4G078300 Prunus persica
Psat7g090360 Pisum sativum
PSO541G6449 Papaver somniferum
PSO675G5964 Papaver somniferum
QL05p058975 Quercus lobata
RcHm_v2.0_Chr5g0013601 Rosa chinensis
RcHm_v2.0_Chr5g0013661 Rosa chinensis
Rhsim13G0194100 Rhododendron simsii
RhsimUnG0243800 Rhododendron simsii
Sabra04G0086300 Salix brachista
SalBow7G1169 Salvia bowleyana
Sc17g0004990 Simmondsia chinensis
Sed0015619 Sechium edule
SEGI_24709 Sequoiadendron giganteum
SEGI_26759 Sequoiadendron giganteum
SGA_v2.0_scaffold106G30638 Striga asiatica
SGA_v2.0_scaffold51G18635 Striga asiatica
SMO118G0248 Selaginella moellendorffii
Solyc02g070780.4 Solanum lycopersicum
Sopen02g019850 Solanum pennellii
Sp2g11130 Schrenkiella parvula
TAR626G0055 Trochodendron aralioides
THA.LOC104806124 Tarenaya hassleriana
Thecc.06G152900 Theobroma cacao
Thhalv10000786m.g Eutrema salsugineum
TWI73G0468 Tripterygium wilfordii
unitig_21.g20641 Utricularia gibba
unitig_21.g20642 Utricularia gibba
vmacro09958 Vaccinium macrocarpon
vmacro22572 Vaccinium macrocarpon
vmacro22573 Vaccinium macrocarpon
VMungo1309G0878 Vigna mungo
Zm00001eb290510 Zea mays
Zm00001eb351990 Zea mays

User provided reference genes

Program Settings