Gene: Solyc02g070780.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g070780.4
  • Transcript Identifier Solyc02g070780.4.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 38401654-38407894 : negative

Gene Family Information

  • ID HOM05D000361
  • #Genes/#Species 1321/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g070780.4.1
  • uniprot A0A3Q7F3W7
  • gene_id Solyc02g070780

Descriptions

  • Description DNA helicase (AHRD V3.3 *** A0A2G2XDX1_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006270
IEA
GOA DatabaseDNA replication initiation
GO:0006270
IEA
InterProDNA replication initiation
GO:0006268
ISO
PLAZA Integrative OrthologyDNA unwinding involved in DNA replication AT5G46280
GO:0000727
IBA
GOA Databasedouble-strand break repair via break-induced replication
GO:0006271
IBA
GOA DatabaseDNA strand elongation involved in DNA replication
GO:0006267
IBA
GOA Databasepre-replicative complex assembly involved in nuclear cell cycle DNA replication
GO:1902975
IBA
GOA Databasemitotic DNA replication initiation
GO:0032508
IEA
GOA DatabaseDNA duplex unwinding
GO:0032508
IEA
InterProDNA duplex unwinding
GO:0006260
IEA
GOA DatabaseDNA replication

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G46280
GO:0017116
IBA
GOA Databasesingle-stranded DNA helicase activity
GO:0003697
IBA
GOA Databasesingle-stranded DNA binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004386
IEA
GOA Databasehelicase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003678
IEA
GOA DatabaseDNA helicase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000785
ISO
PLAZA Integrative Orthologychromatin AT5G46280
GO:0000347
ISO
PLAZA Integrative OrthologyTHO complex AT5G46280
GO:0005634
IBA
IEA
GOA Databasenucleus
GO:0042555
IBA
IEA
GOA DatabaseMCM complex
GO:0042555
IEA
InterProMCM complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008046 DNA replication licensing factor Mcm3
IPR031327 Mini-chromosome maintenance protein
IPR033762 MCM OB domain
IPR003593 AAA+ ATPase domain
IPR001208 MCM domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR041562 MCM, AAA-lid domain
IPR012340 Nucleic acid-binding, OB-fold
IPR027925 MCM N-terminal domain
Mapman id Description
13.2.1.2.2 Cell cycle organisation.DNA replication.preinitiation.MCM replicative DNA helicase complex.component MCM3