Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p13030 Brassica napus
A10p14350 Brassica napus
Aa31LG3G12920 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.346 Anthoceros agrestis
Actinidia29912 Actinidia chinensis
Actinidia38458 Actinidia chinensis
Ah.09g228040 Amaranthus hybridus
AL8G32930 Arabidopsis lyrata
Aqoxy7G01155 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1PI95V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HJX0E8 Arachis hypogaea
AT5G57030 Arabidopsis thaliana
ATR0716G023 Amborella trichopoda
Atru.chr7.1632 Acer truncatum
AUR62029030 Chenopodium quinoa
AUR62033926 Chenopodium quinoa
BcaB01g04439 Brassica carinata
BcaB05g22312 Brassica carinata
BcaB08g36016 Brassica carinata
BcaB08g36018 Brassica carinata
BcaB08g36021 Brassica carinata
BcaB08g36024 Brassica carinata
BcaC01g06460 Brassica carinata
BcaC04g20021 Brassica carinata
BolC3t13962H Brassica oleracea
BolC9t57717H Brassica oleracea
BraA03t10613Z Brassica rapa
BraA10t43526Z Brassica rapa
C03p15210 Brassica napus
C09p48690 Brassica napus
CAN.G1583.7 Capsicum annuum
CAN.G276.10 Capsicum annuum
CANSAT37G0002 Cannabis sativa
CARHR270780 Cardamine hirsuta
Carub.0008s1753 Capsella rubella
Ca_13129_v3 Cicer arietinum L.
CBR_g31296 Chara braunii
Cc06_g11680 Coffea canephora
CDE05G1519 Ceratophyllum demersum
Cfa003054 Carpinus fangiana
Ciclev10008410m.g Citrus clementina
CiPaw.04G147700 Carya illinoinensis
ClCG11G001670 Citrullus lanatus
COL.COLO4_18171 Corchorus olitorius
Cpa.g.sc28.134 Carica papaya
Cre06.g267600 Chlamydomonas reinhardtii
CsaV3_2G001370 Cucumis sativus L.
CSS0031227 Camellia sinensis var. sinensis
DCAR_028276 Daucus carota
Dinv36788 Davidia involucrata
Dinv42343 Davidia involucrata
Duzib187G0409 Durio zibethinus
ECA240G2539 Erigeron canadensis
EL10Ac8g19172 Beta vulgaris
Eucgr.C03415 Eucalyptus grandis
FAN19G0647 Fragaria x ananassa
FAN23G2221 Fragaria x ananassa
FAN26G1636 Fragaria x ananassa
FAN26G2680 Fragaria x ananassa
FAN28G1754 Fragaria x ananassa
FvH4_1g07950 Fragaria vesca
Glyma.04G195633 Glycine max
Glyma.09G066200 Glycine max
Glyma.15G172200 Glycine max
Gohir.A05G031300 Gossypium hirsutum
Gohir.A07G012400 Gossypium hirsutum
Gohir.D05G032700 Gossypium hirsutum
Gohir.D07G012200 Gossypium hirsutum
Gorai.001G012900 Gossypium raimondii
Gorai.009G032900 Gossypium raimondii
GSVIVG01015169001 Vitis vinifera
HanXRQChr03g0060261 Helianthus annuus
HanXRQChr05g0128961 Helianthus annuus
Haze_25942 Corylus avellana
Hma1.2p1_0672F.1_g200970 Hydrangea macrophylla
HPP92_009128 Vanilla planifolia
Hund08694 Selenicereus undatus
Lalb_Chr08g0232411 Lupinus albus
Lj4A290G39 Lonicera japonica
Lj6g0021332 Lotus japonicus
Lsat_1_v5_gn_7_34600 Lactuca sativa
Manes.16G099600 Manihot esculenta
Mapoly0057s0089 Marchantia polymorpha
MBI05_g12580_MAGBIO Magnolia biondii
MD02G1083500 Malus domestica
Medtr2g040060 Medicago truncatula
MELO3C004633.2 Cucumis melo
Migut.L01523 Erythranthe guttata
MSTRG.26445 Avicennia marina
Nitab4.5_0002642g0140 Nicotiana tabacum
Nitab4.5_0002824g0130 Nicotiana tabacum
Nn8g38788 Nelumbo nucifera
Oeu051301.2 Olea europaea
Os01g0581300 Oryza sativa ssp. japonica
Peaxi162Scf00498g00430 Petunia axillaris
PGR044G0216 Punica granatum
PGSC0003DMG400000333 Solanum tuberosum
Phvul.009G230300 Phaseolus vulgaris
Potri.006G147300 Populus trichocarpa
Pp3c11_14590 Physcomitrium patens
Pp3c7_15320 Physcomitrium patens
PRCOL_00002058 Prasinoderma coloniale
Prupe.7G205600 Prunus persica
Prupe.I002500 Prunus persica
Psat1g140400 Pisum sativum
PSO063G2279 Papaver somniferum
PSO832G4340 Papaver somniferum
QL02p062060 Quercus lobata
RcHm_v2.0_Chr2g0093831 Rosa chinensis
Rhsim03G0231100 Rhododendron simsii
Sabra06G0116300 Salix brachista
SalBow1G4112 Salvia bowleyana
Sc18g0002290 Simmondsia chinensis
Sed0013443 Sechium edule
SEGI_06334 Sequoiadendron giganteum
SEGI_30255 Sequoiadendron giganteum
SGA_v2.0_scaffold21G09418 Striga asiatica
SMO143G0184 Selaginella moellendorffii
Solyc12g008980.3 Solanum lycopersicum
Sopen12g003910 Solanum pennellii
Sp6g18740 Schrenkiella parvula
TAR626G1800 Trochodendron aralioides
THA.LOC104811752 Tarenaya hassleriana
Thecc.09G084800 Theobroma cacao
Thhalv10013234m.g Eutrema salsugineum
TPR.G29490 Trifolium pratense
TPR.G29491 Trifolium pratense
TPR.G464 Trifolium pratense
TWI34G1733 Tripterygium wilfordii
unitig_899.g15176 Utricularia gibba
vmacro06304 Vaccinium macrocarpon
VMungo1309G2997 Vigna mungo
Zm00001eb357090 Zea mays

User provided reference genes

Program Settings