Gene: Cfa003054
General Information
Structural Information
- Species Carpinus fangiana
- Gene Identifier Cfa003054
- Transcript Identifier Cfa003054.t1
- Gene Type Coding gene
- Location Cfa01 : 45771105-45788072 : negative
Gene Family Information
- ID HOM05D001717
- #Genes/#Species 377/99
- Phylogenetic origin
- ID ORTHO05D007217
- #Genes/#Species 133/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Cfa003054.t1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016567 | IEA | InterPro | protein ubiquitination | |
| GO:0006468 | IEA | InterPro | protein phosphorylation | |
| GO:0016117 | IEA | InterPro | carotenoid biosynthetic process | |
| GO:0009765 | ISO | PLAZA Integrative Orthology | photosynthesis, light harvesting | AT5G57030 |
| GO:0016120 | ISO | PLAZA Integrative Orthology | carotene biosynthetic process | AT5G57030 |
| GO:0016123 | ISO | PLAZA Integrative Orthology | xanthophyll biosynthetic process | AT5G57030 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004842 | IEA | InterPro | ubiquitin-protein transferase activity | |
| GO:0004672 | IEA | InterPro | protein kinase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0016705 | IEA | InterPro | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | |
| GO:0045435 | ISO | PLAZA Integrative Orthology | lycopene epsilon cyclase activity | AT5G57030 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G57030 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036188 | FAD/NAD(P)-binding domain superfamily |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold |
| IPR003613 | U box domain |
| IPR011009 | Protein kinase-like domain superfamily |
| IPR000719 | Protein kinase domain |
| IPR010108 | Lycopene cyclase, beta/epsilon |
| Mapman id | Description |
|---|---|
| 18.4.1.39.2 | Protein modification.phosphorylation.TKL protein kinase superfamily.RLCK-IX receptor-like protein kinase families.receptor-like protein kinase (RLCK-IXb) |
| 9.1.6.1.5 | Secondary metabolism.terpenoids.carotenoid biosynthesis.carotenes.lycopene epsilon cyclase (LCY-e) |