Gene: Solyc12g008980.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g008980.3
  • Transcript Identifier Solyc12g008980.3.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 2334604-2339559 : positive

Gene Family Information

  • ID HOM05D001717
  • #Genes/#Species 377/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g008980.3.1
  • uniprot A0A3Q7J3B0
  • gene_id Solyc12g008980

Descriptions

  • Description Delta,Pfam:PF05834
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016117
IEA
GOA Databasecarotenoid biosynthetic process
GO:0016117
IEA
InterProcarotenoid biosynthetic process
GO:0009765
ISO
PLAZA Integrative Orthologyphotosynthesis, light harvesting AT5G57030
GO:0016120
ISO
PLAZA Integrative Orthologycarotene biosynthetic process AT5G57030
GO:0016123
ISO
PLAZA Integrative Orthologyxanthophyll biosynthetic process AT5G57030

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016705
IEA
GOA Databaseoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016705
IEA
InterProoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0045435
ISO
PLAZA Integrative Orthologylycopene epsilon cyclase activity AT5G57030

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G57030

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036188 FAD/NAD(P)-binding domain superfamily
IPR010108 Lycopene cyclase, beta/epsilon
Mapman id Description
9.1.6.1.5 Secondary metabolism.terpenoids.carotenoid biosynthesis.carotenes.lycopene epsilon cyclase (LCY-e)