Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p35310 Brassica napus
A09p06460 Brassica napus
Aa31LG11G3730 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2025 Anthoceros agrestis
Actinidia08698 Actinidia chinensis
Actinidia28282 Actinidia chinensis
Actinidia34269 Actinidia chinensis
Ah.07g204700 Amaranthus hybridus
AL6G36080 Arabidopsis lyrata
Aqoxy7G02157 Aquilegia oxysepala
Aqoxy7G02158 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2GB72X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.88XX4I Arachis hypogaea
AT5G24490 Arabidopsis thaliana
ATR1155G047 Amborella trichopoda
Atru.chr12.2428 Acer truncatum
AUR62006005 Chenopodium quinoa
AUR62035622 Chenopodium quinoa
BcaB04g19814 Brassica carinata
BcaC04g23547 Brassica carinata
BcaC09g49688 Brassica carinata
BcaC09g52277 Brassica carinata
BcaC09g52279 Brassica carinata
BcaNung01238 Brassica carinata
BolC1t02230H Brassica oleracea
BraA06t26457Z Brassica rapa
BraA09t36289Z Brassica rapa
C01p22870 Brassica napus
C01p22900 Brassica napus
C01p22930 Brassica napus
C01p22940 Brassica napus
C01p22950 Brassica napus
C09p07180 Brassica napus
CAN.G65.152 Capsicum annuum
CANSAT21G1962 Cannabis sativa
CARHR188930 Cardamine hirsuta
Carub.0006s2231 Capsella rubella
Ca_16779_v3 Cicer arietinum L.
CBR_g44535 Chara braunii
CDE02G4511 Ceratophyllum demersum
CDE05G3242 Ceratophyllum demersum
Cfa016160 Carpinus fangiana
Ciclev10021260m.g Citrus clementina
CiPaw.05G205100 Carya illinoinensis
ClCG02G000010 Citrullus lanatus
COL.COLO4_14370 Corchorus olitorius
Cpa.g.sc3.153 Carica papaya
Cre05.g237450 Chlamydomonas reinhardtii
CsaV3_2G019690 Cucumis sativus L.
CSS0030523 Camellia sinensis var. sinensis
CSS0042637 Camellia sinensis var. sinensis
DCAR_020372 Daucus carota
Dinv29211 Davidia involucrata
Duzib205G0029 Durio zibethinus
ECA232G2160 Erigeron canadensis
EL10Ac3g05180 Beta vulgaris
Eucgr.A01406 Eucalyptus grandis
FAN01G0684 Fragaria x ananassa
FAN03G0834 Fragaria x ananassa
FAN10G1912 Fragaria x ananassa
FAN10G2230 Fragaria x ananassa
FvH4_7g32900 Fragaria vesca
Glyma.04G228400 Glycine max
Glyma.06G136500 Glycine max
Gohir.A08G104500 Gossypium hirsutum
Gohir.D08G116100 Gossypium hirsutum
Gorai.004G125000 Gossypium raimondii
GSVIVG01038643001 Vitis vinifera
HanXRQChr04g0105951 Helianthus annuus
Haze_00297 Corylus avellana
HPP92_015050 Vanilla planifolia
Hund09713 Selenicereus undatus
Lalb_Chr08g0239611 Lupinus albus
Lj1g0025829 Lotus japonicus
Lj3A895G46 Lonicera japonica
Lsat_1_v5_gn_9_50040 Lactuca sativa
Manes.05G197600 Manihot esculenta
Mapoly0136s0019 Marchantia polymorpha
MBI08_g17822_MAGBIO Magnolia biondii
MBI12_g14495_MAGBIO Magnolia biondii
MCO12G039 Micromonas commoda
MD07G1298900 Malus domestica
Medtr3g092720 Medicago truncatula
MELO3C023190.2 Cucumis melo
Migut.F00153 Erythranthe guttata
Migut.F00988 Erythranthe guttata
MSTRG.26978 Avicennia marina
Nitab4.5_0000115g0060 Nicotiana tabacum
Nitab4.5_0002895g0020 Nicotiana tabacum
Nn3g18795 Nelumbo nucifera
Os03g0856500 Oryza sativa ssp. japonica
Peaxi162Scf00618g00020 Petunia axillaris
PGR042G0341 Punica granatum
PGSC0003DMG400027021 Solanum tuberosum
Phvul.009G045100 Phaseolus vulgaris
Potri.011G054700 Populus trichocarpa
Potri.011G055100 Populus trichocarpa
Potri.012G005800 Populus trichocarpa
Potri.012G009001 Populus trichocarpa
Potri.012G026375 Populus trichocarpa
Potri.015G002200 Populus trichocarpa
Pp3c18_22260 Physcomitrium patens
Pp3c21_1350 Physcomitrium patens
Pp3c3_26240 Physcomitrium patens
PRCOL_00006097 Prasinoderma coloniale
Prupe.2G318800 Prunus persica
Psat5g072000 Pisum sativum
PSO063G0961 Papaver somniferum
PSO782G4352 Papaver somniferum
QL09p007195 Quercus lobata
RcHm_v2.0_Chr1g0382861 Rosa chinensis
Rhsim03G0215400 Rhododendron simsii
Sabra12G0002200 Salix brachista
Sabra12G0002900 Salix brachista
Sabra15G0001400 Salix brachista
SalBow6G1442 Salvia bowleyana
Sc13g0010280 Simmondsia chinensis
Sed0000166 Sechium edule
SGA_v2.0_scaffold18G08464 Striga asiatica
SMO145G0182 Selaginella moellendorffii
Solyc06g073090.3 Solanum lycopersicum
Sopen06g029440 Solanum pennellii
Sp2g22850 Schrenkiella parvula
TAR375G0796 Trochodendron aralioides
THA.LOC104798985 Tarenaya hassleriana
Thecc.03G208700 Theobroma cacao
Thhalv10004495m.g Eutrema salsugineum
TPR.G33623 Trifolium pratense
TWI23G0506 Tripterygium wilfordii
unitig_748.g7278 Utricularia gibba
vmacro06441 Vaccinium macrocarpon
vmacro22782 Vaccinium macrocarpon
VMungo1309G0132 Vigna mungo
Zm00001eb064950 Zea mays

User provided reference genes

Program Settings