Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p46740 Brassica napus
Aa31LG10G9270 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.410 Anthoceros agrestis
Actinidia01490 Actinidia chinensis
Actinidia21204 Actinidia chinensis
Actinidia24361 Actinidia chinensis
Ah.15g093160 Amaranthus hybridus
AL5G34740 Arabidopsis lyrata
Aqoxy2G02934 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.D5VDWJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JXQ8LX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VZZJ8Q Arachis hypogaea
AT3G53760 Arabidopsis thaliana
ATR0057G121 Amborella trichopoda
Atru.chr5.1139 Acer truncatum
AUR62008670 Chenopodium quinoa
AUR62018540 Chenopodium quinoa
AUR62025574 Chenopodium quinoa
BcaB01g00241 Brassica carinata
BcaB01g00245 Brassica carinata
BcaC07g39735 Brassica carinata
BolC8t50508H Brassica oleracea
BraA09t40136Z Brassica rapa
C08p29070 Brassica napus
CAN.G472.10 Capsicum annuum
CARHR163650 Cardamine hirsuta
Carub.0005s2034 Capsella rubella
Ca_10329_v3 Cicer arietinum L.
CBR_g8601 Chara braunii
CBR_g8603 Chara braunii
Cc01_g20910 Coffea canephora
CDE01G0629 Ceratophyllum demersum
Cfa005905 Carpinus fangiana
Ciclev10018978m.g Citrus clementina
CiPaw.08G094700 Carya illinoinensis
ClCG03G013010 Citrullus lanatus
COL.COLO4_23337 Corchorus olitorius
Cpa.g.sc9.255 Carica papaya
Cre01.g019150 Chlamydomonas reinhardtii
CsaV3_1G043050 Cucumis sativus L.
CSS0009761 Camellia sinensis var. sinensis
DCAR_018329 Daucus carota
Dinv02562 Davidia involucrata
Dinv33058 Davidia involucrata
ECA236G1870 Erigeron canadensis
ECA247G4025 Erigeron canadensis
EL10Ac7g17514 Beta vulgaris
Eucgr.K03489 Eucalyptus grandis
FAN15G1023 Fragaria x ananassa
FAN20G0148 Fragaria x ananassa
FAN24G3174 Fragaria x ananassa
FvH4_2g25810 Fragaria vesca
Glyma.02G017400 Glycine max
Glyma.10G017800 Glycine max
Gohir.A08G076500 Gossypium hirsutum
Gohir.A11G114100 Gossypium hirsutum
Gohir.D08G086000 Gossypium hirsutum
Gohir.D11G119200 Gossypium hirsutum
Gorai.004G090500 Gossypium raimondii
Gorai.007G127700 Gossypium raimondii
GSVIVG01028027001 Vitis vinifera
HanXRQChr04g0114151 Helianthus annuus
HanXRQChr10g0285001 Helianthus annuus
HanXRQChr10g0285011 Helianthus annuus
Haze_04945 Corylus avellana
Hma1.2p1_0491F.1_g164650 Hydrangea macrophylla
HPP92_007056 Vanilla planifolia
Hund05431 Selenicereus undatus
Lalb_Chr02g0146401 Lupinus albus
Lalb_Chr21g0309241 Lupinus albus
Lj2A1196G43 Lonicera japonica
Lj2A1196G44 Lonicera japonica
Lj2C1196G7 Lonicera japonica
Lj5g0001867 Lotus japonicus
Lj5g0006803 Lotus japonicus
Lj5g0011129 Lotus japonicus
Lj9C128T17 Lonicera japonica
Lsat_1_v5_gn_8_164240 Lactuca sativa
Lsat_1_v5_gn_9_43261 Lactuca sativa
Lsat_1_v5_gn_9_5381 Lactuca sativa
Manes.05G061800 Manihot esculenta
Mapoly0009s0235 Marchantia polymorpha
MBI14_g32928_MAGBIO Magnolia biondii
MCO03G526 Micromonas commoda
MD03G1288900 Malus domestica
MD11G1309000 Malus domestica
Medtr1g088410 Medicago truncatula
MELO3C015161.2 Cucumis melo
MELO3C026912.2 Cucumis melo
Migut.D00148 Erythranthe guttata
MSTRG.9184 Avicennia marina
Nitab4.5_0001879g0170 Nicotiana tabacum
Nitab4.5_0002433g0080 Nicotiana tabacum
Nn3g21501 Nelumbo nucifera
Oeu054121.1 Olea europaea
Os05g0154500 Oryza sativa ssp. japonica
Peaxi162Scf00001g42030 Petunia axillaris
PGR044G0168 Punica granatum
PGR044G2013 Punica granatum
PGSC0003DMG400031813 Solanum tuberosum
Phvul.007G147200 Phaseolus vulgaris
Potri.014G128400 Populus trichocarpa
Pp3c14_20420 Physcomitrium patens
PRCOL_00000976 Prasinoderma coloniale
Prupe.8G262200 Prunus persica
Psat6g165160 Pisum sativum
PSO339G1812 Papaver somniferum
PSO384G2678 Papaver somniferum
QL12p028391 Quercus lobata
RcHm_v2.0_Chr6g0294121 Rosa chinensis
Rhsim13G0009800 Rhododendron simsii
Rhsim13G0043200 Rhododendron simsii
SalBow3G0448 Salvia bowleyana
Sc05g0003770 Simmondsia chinensis
Sed0026689 Sechium edule
SEGI_07599 Sequoiadendron giganteum
SEGI_35866 Sequoiadendron giganteum
SGA_v2.0_scaffold178G39483 Striga asiatica
SGA_v2.0_scaffold1G00361 Striga asiatica
SHI15144 Sapria himalayana
SMO364G0941 Selaginella moellendorffii
Solyc09g075190.3 Solanum lycopersicum
Sopen09g030010 Solanum pennellii
Sp5g08620 Schrenkiella parvula
TAR365G0367 Trochodendron aralioides
TAR365G0888 Trochodendron aralioides
THA.LOC104802176 Tarenaya hassleriana
Thecc.01G301400 Theobroma cacao
Thhalv10010145m.g Eutrema salsugineum
TPR.G33956 Trifolium pratense
TWI59G0706 Tripterygium wilfordii
unitig_32.g10658 Utricularia gibba
vmacro02446 Vaccinium macrocarpon
VMungo0720G1277 Vigna mungo
Zm00001eb282720 Zea mays

User provided reference genes

Program Settings