Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p15830 Brassica napus
Aa31LG7G14750 Aethionema arabicum
Aa31LG7G15750 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.33 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.34 Anthoceros agrestis
Actinidia18030 Actinidia chinensis
Ah.01g023340 Amaranthus hybridus
AL2G10240 Arabidopsis lyrata
AL7G48900 Arabidopsis lyrata
Aqoxy5G01087 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.M4HWYD Arachis hypogaea
AT5G40820 Arabidopsis thaliana
ATR0661G239 Amborella trichopoda
ATR0661G423 Amborella trichopoda
Atru.chr1.2616 Acer truncatum
Atru.chr5.3458 Acer truncatum
AUR62010002 Chenopodium quinoa
AUR62012990 Chenopodium quinoa
BcaB06g27763 Brassica carinata
BolC4t26623H Brassica oleracea
BraA04t17214Z Brassica rapa
C04p50230 Brassica napus
CAN.G588.109 Capsicum annuum
CANSAT25G2086 Cannabis sativa
CARHR115960 Cardamine hirsuta
Carub.0008s0072 Capsella rubella
Ca_03288_v3 Cicer arietinum L.
CBR_g6357 Chara braunii
Cc09_g10400 Coffea canephora
CDE09G0008 Ceratophyllum demersum
Cfa005298 Carpinus fangiana
Ciclev10027660m.g Citrus clementina
CiPaw.06G119600 Carya illinoinensis
ClCG02G003850 Citrullus lanatus
COL.COLO4_18014 Corchorus olitorius
COL.COLO4_36420 Corchorus olitorius
Cpa.g.sc20.125 Carica papaya
Cre10.g467200 Chlamydomonas reinhardtii
CsaV3_7G001280 Cucumis sativus L.
CSS0001027 Camellia sinensis var. sinensis
CSS0005128 Camellia sinensis var. sinensis
CSS0020547 Camellia sinensis var. sinensis
CSS0028723 Camellia sinensis var. sinensis
DCAR_022420 Daucus carota
DCAR_022421 Daucus carota
Dinv14134 Davidia involucrata
Duzib052G0295 Durio zibethinus
ECA234G4688 Erigeron canadensis
EL10Ac9g21328 Beta vulgaris
Eucgr.I01462 Eucalyptus grandis
FAN15G0209 Fragaria x ananassa
FAN15G3013 Fragaria x ananassa
FAN20G0548 Fragaria x ananassa
FAN24G0945 Fragaria x ananassa
FAN27G0836 Fragaria x ananassa
FvH4_2g15770 Fragaria vesca
Glyma.10G284200 Glycine max
Gohir.A12G035900 Gossypium hirsutum
Gohir.D12G036650 Gossypium hirsutum
Gohir.D12G036700 Gossypium hirsutum
Gorai.008G037900 Gossypium raimondii
GSVIVG01023964001 Vitis vinifera
HanXRQChr05g0141851 Helianthus annuus
Haze_02089 Corylus avellana
Hma1.2p1_0032F.1_g019090 Hydrangea macrophylla
HPP92_022387 Vanilla planifolia
HPP92_022388 Vanilla planifolia
Hund00010 Selenicereus undatus
Lalb_Chr06g0163781 Lupinus albus
Lj5A175T98 Lonicera japonica
Lj5g0001935 Lotus japonicus
Lsat_1_v5_gn_3_6601 Lactuca sativa
Manes.04G069900 Manihot esculenta
Mapoly0026s0077 Marchantia polymorpha
MBI18_g09841_MAGBIO Magnolia biondii
MCO16G510 Micromonas commoda
MD05G1126600 Malus domestica
MD10G1129500 Malus domestica
MD10G1129600 Malus domestica
MD10G1129700 Malus domestica
MD10G1129800 Malus domestica
Medtr1g113830 Medicago truncatula
MELO3C013324.2 Cucumis melo
Migut.B00045 Erythranthe guttata
Nitab4.5_0004557g0050 Nicotiana tabacum
Nitab4.5_0004867g0090 Nicotiana tabacum
Nn6g31886 Nelumbo nucifera
Oeu028956.2 Olea europaea
Os06g0724700 Oryza sativa ssp. japonica
Peaxi162Scf00362g00442 Petunia axillaris
PGR142G2610 Punica granatum
PGSC0003DMG401018643 Solanum tuberosum
PGSC0003DMG402018643 Solanum tuberosum
Phvul.007G016800 Phaseolus vulgaris
Phvul.007G017000 Phaseolus vulgaris
Potri.004G179000 Populus trichocarpa
Pp3c6_3460 Physcomitrium patens
PRCOL_00000373 Prasinoderma coloniale
Prupe.8G170300 Prunus persica
Psat6g232760 Pisum sativum
PSO170G1896 Papaver somniferum
PSO210G4774 Papaver somniferum
PSO421G0126 Papaver somniferum
PSO421G0641 Papaver somniferum
QL11p050057 Quercus lobata
QL11p050211 Quercus lobata
QL11p052526 Quercus lobata
QL11p052553 Quercus lobata
RcHm_v2.0_Chr6g0279121 Rosa chinensis
Rhsim11G0078400 Rhododendron simsii
Rhsim11G0194400 Rhododendron simsii
Sabra04G0120500 Salix brachista
Sc18g0006200 Simmondsia chinensis
Sed0017558 Sechium edule
SEGI_26648 Sequoiadendron giganteum
SEGI_35062 Sequoiadendron giganteum
SEGI_36815 Sequoiadendron giganteum
SGA_v2.0_scaffold32G13315 Striga asiatica
SGA_v2.0_scaffold6G03244 Striga asiatica
SMO203G0188 Selaginella moellendorffii
Solyc01g111870.3 Solanum lycopersicum
Sopen01g053910 Solanum pennellii
Sp4g00080 Schrenkiella parvula
TAR628G1453 Trochodendron aralioides
Thecc.02G053500 Theobroma cacao
Thhalv10027615m.g Eutrema salsugineum
TPR.G13225 Trifolium pratense
TPR.G2476 Trifolium pratense
TPR.G2477 Trifolium pratense
TPR.G2496 Trifolium pratense
TWI79G0733 Tripterygium wilfordii
unitig_21.g20845 Utricularia gibba
vmacro02070 Vaccinium macrocarpon
vmacro02297 Vaccinium macrocarpon
VMungo0720G2261 Vigna mungo
Zm00001eb228310 Zea mays

User provided reference genes

Program Settings