Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p10580 Brassica napus
Aa31LG3G9940 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1529 Anthoceros agrestis
Actinidia08716 Actinidia chinensis
Ah.13g071000 Amaranthus hybridus
AL8G29210 Arabidopsis lyrata
Aqoxy5G04389 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DLGH4W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HMHY7M Arachis hypogaea
AT5G54090 Arabidopsis thaliana
ATR0579G153 Amborella trichopoda
Atru.chr12.2507 Acer truncatum
Atru.chr12.2530 Acer truncatum
AUR62005953 Chenopodium quinoa
AUR62028111 Chenopodium quinoa
BcaB05g22108 Brassica carinata
BcaC01g05095 Brassica carinata
BcaC03g14353 Brassica carinata
BolC2t07896H Brassica oleracea
BraA02t06123Z Brassica rapa
C02p17660 Brassica napus
CAN.G303.52 Capsicum annuum
CANSAT21G0133 Cannabis sativa
CARHR267280 Cardamine hirsuta
Carub.0008s1437 Capsella rubella
Ca_05547_v3 Cicer arietinum L.
CBR_g37825 Chara braunii
CBR_g57073 Chara braunii
Cc01_g06440 Coffea canephora
CDE02G2212 Ceratophyllum demersum
CDE02G3254 Ceratophyllum demersum
CDE02G3584 Ceratophyllum demersum
Cfa012930 Carpinus fangiana
Cfa016132 Carpinus fangiana
Ciclev10018840m.g Citrus clementina
CiPaw.05G208400 Carya illinoinensis
ClCG07G009710 Citrullus lanatus
ClCG07G009720 Citrullus lanatus
ClCG07G009730 Citrullus lanatus
COL.COLO4_14395 Corchorus olitorius
Cpa.g.sc3.180 Carica papaya
Cre01.g040350 Chlamydomonas reinhardtii
CsaV3_4G009720 Cucumis sativus L.
CSS0030602 Camellia sinensis var. sinensis
CSS0041054 Camellia sinensis var. sinensis
DCAR_010560 Daucus carota
Dinv17281 Davidia involucrata
Duzib084G0662 Durio zibethinus
ECA238G0251 Erigeron canadensis
EL10Ac3g05139 Beta vulgaris
Eucgr.K00458 Eucalyptus grandis
FAN01G2729 Fragaria x ananassa
FAN03G0390 Fragaria x ananassa
FAN10G1460 Fragaria x ananassa
FAN10G2813 Fragaria x ananassa
FvH4_7g33260 Fragaria vesca
FvH4_7g33280 Fragaria vesca
Glyma.02G221300 Glycine max
Glyma.14G188800 Glycine max
Glyma.14G188900 Glycine max
Glyma.14G188950 Glycine max
Gohir.A12G245000 Gossypium hirsutum
Gohir.D12G245800 Gossypium hirsutum
Gorai.008G263400 Gossypium raimondii
GSVIVG01038675001 Vitis vinifera
HanXRQChr14g0452381 Helianthus annuus
Haze_00328 Corylus avellana
Hma1.2p1_0115F.1_g055690 Hydrangea macrophylla
Hma1.2p1_0115F.1_g055700 Hydrangea macrophylla
HPP92_007410 Vanilla planifolia
Hund21077 Selenicereus undatus
Lalb_Chr10g0103011 Lupinus albus
Lalb_Chr10g0103021 Lupinus albus
Lj1C1030G8 Lonicera japonica
LjContig00155g0000379 Lotus japonicus
Lsat_1_v5_gn_2_5220 Lactuca sativa
Lsat_1_v5_gn_3_16701 Lactuca sativa
Manes.18G108000 Manihot esculenta
Mapoly0023s0121 Marchantia polymorpha
MBI04_g09825_MAGBIO Magnolia biondii
MCO04G146 Micromonas commoda
MD07G1302400 Malus domestica
Medtr5g068600 Medicago truncatula
MELO3C024845.2 Cucumis melo
Migut.F00161 Erythranthe guttata
Nitab4.5_0000021g0180 Nicotiana tabacum
Nitab4.5_0004582g0020 Nicotiana tabacum
Nn1g09652 Nelumbo nucifera
Oeu055378.1 Olea europaea
Os10g0509000 Oryza sativa ssp. japonica
Peaxi162Scf01026g00257 Petunia axillaris
PGR142G0839 Punica granatum
PGSC0003DMG400000575 Solanum tuberosum
Phvul.008G188400 Phaseolus vulgaris
Potri.012G005000 Populus trichocarpa
Pp3c5_20780 Physcomitrium patens
PRCOL_00007048 Prasinoderma coloniale
Prupe.2G321600 Prunus persica
Psat0s1274g0040 Pisum sativum
Psat0s1274g0080 Pisum sativum
Psat7g096080 Pisum sativum
Psat7g096120 Pisum sativum
PSO063G0674 Papaver somniferum
PSO782G1442 Papaver somniferum
PSO782G3476 Papaver somniferum
QL09p006081 Quercus lobata
RcHm_v2.0_Chr1g0334571 Rosa chinensis
RcHm_v2.0_Chr1g0383251 Rosa chinensis
Rhsim03G0218100 Rhododendron simsii
Sabra12G0000700 Salix brachista
Sabra12G0007000 Salix brachista
SalBow6G2866 Salvia bowleyana
Sc19g0000400 Simmondsia chinensis
Sed0019266 Sechium edule
SEGI_01713 Sequoiadendron giganteum
SEGI_06769 Sequoiadendron giganteum
SGA_v2.0_scaffold44G16838 Striga asiatica
SMO239G0005 Selaginella moellendorffii
Solyc03g080010.3 Solanum lycopersicum
Sopen03g021730 Solanum pennellii
Sp6g16120 Schrenkiella parvula
TAR375G1062 Trochodendron aralioides
THA.LOC104825164 Tarenaya hassleriana
Thecc.03G211600 Theobroma cacao
Thhalv10012724m.g Eutrema salsugineum
TPR.G15887 Trifolium pratense
TPR.G27024 Trifolium pratense
TPR.G5823 Trifolium pratense
TPR.G5829 Trifolium pratense
TWI39G1073 Tripterygium wilfordii
unitig_748.g7357 Utricularia gibba
vmacro06471 Vaccinium macrocarpon
VMungo0647G0390 Vigna mungo
VMungo0647G1466 Vigna mungo
VMungo0647G1626 Vigna mungo
VMungo0647G2508 Vigna mungo
Zm00001eb220610 Zea mays

User provided reference genes

Program Settings