Gene: Solyc03g080010.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc03g080010.3
  • Transcript Identifier Solyc03g080010.3.1
  • Gene Type Coding gene
  • Location SL4.0ch03 : 46440131-46454406 : negative

Gene Family Information

  • ID HOM05D002535
  • #Genes/#Species 268/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc03g080010.3.1
  • uniprot A0A3Q7G9D8
  • gene_id Solyc03g080010

Descriptions

  • Description DNA mismatch repair protein MutS (AHRD V3.3 *** A0A200R035_9MAGN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006298
IEA
GOA Databasemismatch repair
GO:0006298
IEA
InterPromismatch repair
GO:0045910
IEA
GOA Databasenegative regulation of DNA recombination
GO:0045910
IEA
InterPronegative regulation of DNA recombination
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0008094
IBA
GOA DatabaseATPase, acting on DNA
GO:0030983
IBA
IEA
GOA Databasemismatched DNA binding
GO:0030983
IEA
InterPromismatched DNA binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0004519
IEA
InterProendonuclease activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0016887
IEA
InterProATP hydrolysis activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032300
IBA
GOA Databasemismatch repair complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR045076 DNA mismatch repair MutS family
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR005747 Endonuclease MutS2
IPR036187 DNA mismatch repair protein MutS, core domain superfamily
IPR000432 DNA mismatch repair protein MutS, C-terminal
Mapman id Description
35.1 not assigned.annotated