Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p14190 Brassica napus
Aa31LG9G15130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3532 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3537 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.220 Anthoceros agrestis
Actinidia02198 Actinidia chinensis
Ah.07g199260 Amaranthus hybridus
AL7G48280 Arabidopsis lyrata
AL7G48350 Arabidopsis lyrata
Aqoxy7G00853 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B9CQCD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HW9JRE Arachis hypogaea
AT5G41150 Arabidopsis thaliana
ATR0107G001 Amborella trichopoda
ATR0665G232 Amborella trichopoda
Atru.chr9.1200 Acer truncatum
Atru.chr9.1201 Acer truncatum
Atru.chr9.1202 Acer truncatum
Atru.chr9.1203 Acer truncatum
AUR62007171 Chenopodium quinoa
AUR62018833 Chenopodium quinoa
BcaB06g27602 Brassica carinata
BcaC02g08980 Brassica carinata
BolC4t26415H Brassica oleracea
BraA04t17079Z Brassica rapa
C04p48230 Brassica napus
CAN.G572.14 Capsicum annuum
CANSAT21G2194 Cannabis sativa
CARHR213220 Cardamine hirsuta
Carub.0007s3432 Capsella rubella
Ca_24613_v3 Cicer arietinum L.
CBR_g39228 Chara braunii
CBR_g69645 Chara braunii
Cc08_g11250 Coffea canephora
CDE02G0676 Ceratophyllum demersum
Cfa012332 Carpinus fangiana
Cfa026920 Carpinus fangiana
Ciclev10024418m.g Citrus clementina
CiPaw.11G072100 Carya illinoinensis
ClCG09G012670 Citrullus lanatus
COL.COLO4_06683 Corchorus olitorius
Cpa.g.c28699.1 Carica papaya
Cpa.g.sc98.72 Carica papaya
Cre06.g311400 Chlamydomonas reinhardtii
CsaV3_3G049790 Cucumis sativus L.
CSS0023599 Camellia sinensis var. sinensis
DCAR_000656 Daucus carota
Dinv25138 Davidia involucrata
Duzib205G1274 Durio zibethinus
ECA246G2103 Erigeron canadensis
EL10Ac5g12260 Beta vulgaris
Eucgr.E00349 Eucalyptus grandis
FAN13G0006 Fragaria x ananassa
FAN18G1605 Fragaria x ananassa
FvH4_5g20470 Fragaria vesca
Glyma.01G204533 Glycine max
Glyma.11G038500 Glycine max
Gohir.A08G162700 Gossypium hirsutum
Gohir.D08G182700 Gossypium hirsutum
Gorai.004G191700 Gossypium raimondii
GSVIVG01002051001 Vitis vinifera
GSVIVG01002647001 Vitis vinifera
HanXRQChr01g0016001 Helianthus annuus
Haze_08360 Corylus avellana
Hma1.2p1_3159F.1_g333410 Hydrangea macrophylla
HPP92_000025 Vanilla planifolia
HPP92_000026 Vanilla planifolia
HPP92_001389 Vanilla planifolia
HPP92_002782 Vanilla planifolia
HPP92_012638 Vanilla planifolia
HPP92_013056 Vanilla planifolia
HPP92_027917 Vanilla planifolia
HPP92_028027 Vanilla planifolia
HPP92_028028 Vanilla planifolia
HPP92_028029 Vanilla planifolia
HPP92_028226 Vanilla planifolia
Hund14477 Selenicereus undatus
Lalb_Chr09g0324141 Lupinus albus
Lj2g0012346 Lotus japonicus
Lj8C277T15 Lonicera japonica
Lsat_1_v5_gn_3_15381 Lactuca sativa
Manes.01G089700 Manihot esculenta
Mapoly0007s0092 Marchantia polymorpha
MBI04_g36289_MAGBIO Magnolia biondii
MBI04_g38561_MAGBIO Magnolia biondii
MCO16G346 Micromonas commoda
MD04G1054800 Malus domestica
MD06G1046600 Malus domestica
Medtr5g013480 Medicago truncatula
MELO3C003338.2 Cucumis melo
Migut.E01262 Erythranthe guttata
Migut.E01632 Erythranthe guttata
MSTRG.13777 Avicennia marina
Nitab4.5_0003335g0030 Nicotiana tabacum
Nitab4.5_0004227g0030 Nicotiana tabacum
Nn1g00744 Nelumbo nucifera
Oeu028057.3 Olea europaea
Os03g0100400 Oryza sativa ssp. japonica
Peaxi162Scf00301g00615 Petunia axillaris
PGR042G1059 Punica granatum
PGSC0003DMG400026214 Solanum tuberosum
Phvul.002G001900 Phaseolus vulgaris
Potri.001G150400 Populus trichocarpa
Pp3c18_11670 Physcomitrium patens
PRCOL_00000830 Prasinoderma coloniale
Prupe.5G054900 Prunus persica
Psat0s3354g0040 Pisum sativum
Psat2g175720 Pisum sativum
Psat5g084960 Pisum sativum
Psat5g140400 Pisum sativum
Psat7g123840 Pisum sativum
PSO675G3297 Papaver somniferum
QL12p008620 Quercus lobata
RcHm_v2.0_Chr7g0205791 Rosa chinensis
Rhsim07G0136100 Rhododendron simsii
Sabra01G0120200 Salix brachista
SalBow1G0188 Salvia bowleyana
SalBow1G4075 Salvia bowleyana
Sc01g0007960 Simmondsia chinensis
Sed0013079 Sechium edule
Sed0025805 Sechium edule
SEGI_01687 Sequoiadendron giganteum
SEGI_02234 Sequoiadendron giganteum
SGA_v2.0_scaffold6G03161 Striga asiatica
SHI07797 Sapria himalayana
SMO118G0017 Selaginella moellendorffii
Solyc08g077800.4 Solanum lycopersicum
Sopen08g026310 Solanum pennellii
Sp7g00750 Schrenkiella parvula
SpUn0010_0230 Schrenkiella parvula
TAR636G0264 Trochodendron aralioides
THA.LOC104807928 Tarenaya hassleriana
Thecc.03G239300 Theobroma cacao
Thhalv10027633m.g Eutrema salsugineum
TPR.G31429 Trifolium pratense
TPR.G31432 Trifolium pratense
TWI81G0509 Tripterygium wilfordii
unitig_699.g19770 Utricularia gibba
vmacro00747 Vaccinium macrocarpon
VMungo1215G0420 Vigna mungo
Zm00001eb208390 Zea mays

User provided reference genes

Program Settings