Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p58100 Brassica napus
Aa31LG2G21970 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.187 Anthoceros agrestis
Actinidia11004 Actinidia chinensis
Actinidia11101 Actinidia chinensis
Ah.03g138410 Amaranthus hybridus
AL7G24110 Arabidopsis lyrata
Aqoxy4G00646 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.LZQ0FA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TSZ6TX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UE4GYS Arachis hypogaea
AT4G28450 Arabidopsis thaliana
ATR0665G052 Amborella trichopoda
Atru.chr6.2875 Acer truncatum
AUR62008772 Chenopodium quinoa
AUR62025466 Chenopodium quinoa
BcaB03g16272 Brassica carinata
BcaC06g32621 Brassica carinata
BolC7t46099H Brassica oleracea
BraA03t14876Z Brassica rapa
C07p56220 Brassica napus
CAN.G209.6 Capsicum annuum
CANSAT64G1696 Cannabis sativa
CARHR236220 Cardamine hirsuta
Carub.0007s1225 Capsella rubella
Ca_13381_v3 Cicer arietinum L.
Ca_30047_v3 Cicer arietinum L.
CBR_g34460 Chara braunii
Cc05_g07670 Coffea canephora
CDE03G0236 Ceratophyllum demersum
CDE04G0034 Ceratophyllum demersum
Cfa014656 Carpinus fangiana
Ciclev10015209m.g Citrus clementina
CiPaw.03G181000 Carya illinoinensis
ClCG02G002370 Citrullus lanatus
COL.COLO4_18046 Corchorus olitorius
COL.COLO4_28034 Corchorus olitorius
Cpa.g.sc83.89 Carica papaya
Cre07.g318702 Chlamydomonas reinhardtii
CsaV3_7G003080 Cucumis sativus L.
CSS0024007 Camellia sinensis var. sinensis
DCAR_013032 Daucus carota
Dinv00035 Davidia involucrata
Dinv07536 Davidia involucrata
Dinv10164 Davidia involucrata
Duzib052G0349 Durio zibethinus
ECA240G2497 Erigeron canadensis
EL10Ac9g20811 Beta vulgaris
Eucgr.K01052 Eucalyptus grandis
FAN07G0711 Fragaria x ananassa
FAN07G1962 Fragaria x ananassa
FAN15G2087 Fragaria x ananassa
FAN20G3107 Fragaria x ananassa
FAN24G0448 Fragaria x ananassa
FAN24G1197 Fragaria x ananassa
FAN24G1576 Fragaria x ananassa
FAN24G2704 Fragaria x ananassa
FAN26G1376 Fragaria x ananassa
FAN27G0984 Fragaria x ananassa
FvH4_2g08930 Fragaria vesca
FvH4_2g10410 Fragaria vesca
FvH4_4g06150 Fragaria vesca
FvH4_4g08600 Fragaria vesca
FvH4_4g08860 Fragaria vesca
FvH4_4g09790 Fragaria vesca
Glyma.02G251700 Glycine max
Glyma.14G065100 Glycine max
Gohir.A03G154700 Gossypium hirsutum
Gohir.D02G177700 Gossypium hirsutum
Gorai.005G199500 Gossypium raimondii
GSVIVG01020601001 Vitis vinifera
HanXRQChr05g0140561 Helianthus annuus
HanXRQChr16g0505891 Helianthus annuus
Haze_13235 Corylus avellana
Haze_13238 Corylus avellana
Hma1.2p1_0002F.1_g002200 Hydrangea macrophylla
HPP92_000278 Vanilla planifolia
Hund07915 Selenicereus undatus
Lalb_Chr25g0280621 Lupinus albus
Lj3g0012051 Lotus japonicus
Lj8C108T5 Lonicera japonica
Lsat_1_v5_gn_4_64440 Lactuca sativa
Manes.13G142500 Manihot esculenta
Mapoly0143s0027 Marchantia polymorpha
MBI07_g29117_MAGBIO Magnolia biondii
MCO01G363 Micromonas commoda
MD08G1220200 Malus domestica
MD15G1410600 Malus domestica
MD15G1410700 Malus domestica
Medtr1g022960 Medicago truncatula
MELO3C018869.2 Cucumis melo
Migut.D00238 Erythranthe guttata
MSTRG.15131 Avicennia marina
Nitab4.5_0000621g0150 Nicotiana tabacum
Nitab4.5_0004546g0040 Nicotiana tabacum
Nn1g06426 Nelumbo nucifera
Oeu016012.1 Olea europaea
Os01g0238900 Oryza sativa ssp. japonica
Peaxi162Scf00845g00022 Petunia axillaris
PGR142G4043 Punica granatum
PGSC0003DMG401009395 Solanum tuberosum
Phvul.006G037700 Phaseolus vulgaris
Potri.007G137300 Populus trichocarpa
Potri.017G014700 Populus trichocarpa
Pp3c9_6000 Physcomitrium patens
PRCOL_00005495 Prasinoderma coloniale
Prupe.1G573700 Prunus persica
Prupe.3G166600 Prunus persica
Prupe.6G177000 Prunus persica
Psat6g009760 Pisum sativum
PSO210G7210 Papaver somniferum
PSO478G0717 Papaver somniferum
PSO782G0979 Papaver somniferum
PSO832G1390 Papaver somniferum
QL08p040074 Quercus lobata
RcHm_v2.0_Chr6g0267881 Rosa chinensis
Rhsim06G0138000 Rhododendron simsii
Sabra17G0011900 Salix brachista
Sc04g0004740 Simmondsia chinensis
Sc04g0004770 Simmondsia chinensis
Sc04g0004780 Simmondsia chinensis
Sc04g0004800 Simmondsia chinensis
Sc21g0003230 Simmondsia chinensis
Sc24g0000990 Simmondsia chinensis
Sed0023046 Sechium edule
SGA_v2.0_scaffold70G23496 Striga asiatica
SMO347G0106 Selaginella moellendorffii
Solyc07g053660.3 Solanum lycopersicum
Sopen07g027630 Solanum pennellii
Sp7g26430 Schrenkiella parvula
TAR624G0407 Trochodendron aralioides
TAR626G1404 Trochodendron aralioides
THA.LOC104804051 Tarenaya hassleriana
Thecc.02G185400 Theobroma cacao
Thhalv10025176m.g Eutrema salsugineum
TPR.G22970 Trifolium pratense
TPR.G30494 Trifolium pratense
TWI14G0319 Tripterygium wilfordii
TWI59G1106 Tripterygium wilfordii
unitig_85.g27364 Utricularia gibba
vmacro12361 Vaccinium macrocarpon
Zm00001eb064830 Zea mays

User provided reference genes

Program Settings