Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p17770 Brassica napus
A08p28860 Brassica napus
Aa31LG7G5660 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1249 Anthoceros agrestis
Actinidia15224 Actinidia chinensis
Actinidia21298 Actinidia chinensis
Ah.01g003720 Amaranthus hybridus
AL1G34850 Arabidopsis lyrata
Aqoxy5G02375 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EB568G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N36HW8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R82D2M Arachis hypogaea
AT1G21690 Arabidopsis thaliana
ATR1001G012 Amborella trichopoda
Atru.chr13.1538 Acer truncatum
AUR62008715 Chenopodium quinoa
AUR62025519 Chenopodium quinoa
AUR62043484 Chenopodium quinoa
BcaB07g32165 Brassica carinata
BcaC05g26087 Brassica carinata
BcaC07g39111 Brassica carinata
BolC5t30765H Brassica oleracea
BolC8t49737H Brassica oleracea
BraA06t24869Z Brassica rapa
BraA08t34817Z Brassica rapa
C05p20660 Brassica napus
C08p21000 Brassica napus
CAN.G1352.4 Capsicum annuum
CAN.G1486.1 Capsicum annuum
CAN.G208.18 Capsicum annuum
CANSAT56G2008 Cannabis sativa
CARHR022040 Cardamine hirsuta
Carub.0001s2112 Capsella rubella
Ca_16595_v3 Cicer arietinum L.
CBR_g49986 Chara braunii
Cc10_g12440 Coffea canephora
Cc10_g12450 Coffea canephora
Cc10_g12460 Coffea canephora
CDE07G1761 Ceratophyllum demersum
Cfa018559 Carpinus fangiana
Cfa022789 Carpinus fangiana
Ciclev10001485m.g Citrus clementina
CiPaw.16G025200 Carya illinoinensis
CiPaw.16G025300 Carya illinoinensis
ClCG11G015940 Citrullus lanatus
COL.COLO4_03955 Corchorus olitorius
Cpa.g.sc64.131 Carica papaya
Cpa.g.sc64.132 Carica papaya
Cre06.g251800 Chlamydomonas reinhardtii
CsaV3_4G028050 Cucumis sativus L.
CsaV3_UNG115920 Cucumis sativus L.
CSS0002859 Camellia sinensis var. sinensis
CSS0035008 Camellia sinensis var. sinensis
DCAR_018873 Daucus carota
Dinv27272 Davidia involucrata
Duzib093G1303 Durio zibethinus
ECA232G1439 Erigeron canadensis
EL10Ac2g03027 Beta vulgaris
Eucgr.F04332 Eucalyptus grandis
FAN15G1662 Fragaria x ananassa
FAN20G2509 Fragaria x ananassa
FAN24G2905 Fragaria x ananassa
FAN27G2248 Fragaria x ananassa
FvH4_2g27570 Fragaria vesca
Glyma.04G246800 Glycine max
Glyma.06G116000 Glycine max
Gohir.A06G046900 Gossypium hirsutum
Gohir.D06G047200 Gossypium hirsutum
Gorai.010G052800 Gossypium raimondii
GSVIVG01008825001 Vitis vinifera
HanXRQChr01g0013731 Helianthus annuus
HanXRQChr11g0326191 Helianthus annuus
Haze_17520 Corylus avellana
Haze_27379 Corylus avellana
Hma1.2p1_0542F.1_g175030 Hydrangea macrophylla
HPP92_021488 Vanilla planifolia
HPP92_021531 Vanilla planifolia
Hund26791 Selenicereus undatus
Lalb_Chr08g0241231 Lupinus albus
Lj1g0021925 Lotus japonicus
Lj7C346G4 Lonicera japonica
Lsat_1_v5_gn_5_59861 Lactuca sativa
Lsat_1_v5_gn_9_71120 Lactuca sativa
Manes.02G166700 Manihot esculenta
Mapoly0014s0096 Marchantia polymorpha
MBI06_g33105_MAGBIO Magnolia biondii
MBI06_g45440_MAGBIO Magnolia biondii
MCO10G401 Micromonas commoda
MD00G1201700 Malus domestica
MD15G1344500 Malus domestica
Medtr3g088380 Medicago truncatula
MELO3C010507.2 Cucumis melo
Migut.L00248 Erythranthe guttata
Migut.O00855 Erythranthe guttata
MSTRG.1421 Avicennia marina
Nitab4.5_0000111g0110 Nicotiana tabacum
Nitab4.5_0006720g0030 Nicotiana tabacum
Nn1g08900 Nelumbo nucifera
Oeu001535.1 Olea europaea
Oeu001536.1 Olea europaea
Oeu032206.1 Olea europaea
Os12g0176500 Oryza sativa ssp. japonica
Peaxi162Scf00310g00416 Petunia axillaris
PGR044G0726 Punica granatum
PGSC0003DMG400006047 Solanum tuberosum
PGSC0003DMG402029181 Solanum tuberosum
Phvul.009G128066 Phaseolus vulgaris
Phvul.009G128132 Phaseolus vulgaris
Potri.002G080100 Populus trichocarpa
Potri.005G181300 Populus trichocarpa
Pp3c3_37360 Physcomitrium patens
PRCOL_00005755 Prasinoderma coloniale
Prupe.1G492200 Prunus persica
Psat5g085800 Pisum sativum
PSO541G1645 Papaver somniferum
PSO675G8498 Papaver somniferum
QL09p033191 Quercus lobata
RcHm_v2.0_Chr6g0296411 Rosa chinensis
Rhsim06G0130900 Rhododendron simsii
Sabra05G0137300 Salix brachista
SalBow7G0673 Salvia bowleyana
Sc02g0005030 Simmondsia chinensis
Sed0019306 Sechium edule
SEGI_33622 Sequoiadendron giganteum
SGA_v2.0_scaffold52G18933 Striga asiatica
SHI06323 Sapria himalayana
SHI06325 Sapria himalayana
SHI06331 Sapria himalayana
SMO308G0051 Selaginella moellendorffii
Solyc11g012820.2 Solanum lycopersicum
Sopen11g007560 Solanum pennellii
Sp1g19230 Schrenkiella parvula
TAR381G1563 Trochodendron aralioides
THA.LOC104800216 Tarenaya hassleriana
Thecc.08G130000 Theobroma cacao
Thecc.08G130500 Theobroma cacao
Thhalv10008129m.g Eutrema salsugineum
TPR.G13461 Trifolium pratense
TWI60G0500 Tripterygium wilfordii
unitig_52.g17218 Utricularia gibba
vmacro12378 Vaccinium macrocarpon
VMungo1309G0926 Vigna mungo
Zm00001eb408240 Zea mays

User provided reference genes

Program Settings