Gene: Solyc11g012820.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g012820.2
  • Transcript Identifier Solyc11g012820.2.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 5659716-5671148 : positive

Gene Family Information

  • ID HOM05D001470
  • #Genes/#Species 431/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g012820.2.1
  • uniprot A0A3Q7ISG3
  • gene_id Solyc11g012820

Descriptions

  • Description Replication factor C subunit 4 (AHRD V3.3 *** A0A2G2WYH3_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006260
IEA
GOA DatabaseDNA replication
GO:0006260
IEA
InterProDNA replication
GO:0006261
IBA
GOA DatabaseDNA-dependent DNA replication
GO:0006281
IBA
GOA DatabaseDNA repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003689
IBA
GOA DatabaseDNA clamp loader activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G21690

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005663
IBA
GOA DatabaseDNA replication factor C complex
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003959 ATPase, AAA-type, core
IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
IPR013748 Replication factor C, C-terminal
IPR003593 AAA+ ATPase domain
IPR000641 CbxX/CfxQ
Mapman id Description
13.2.3.4.2.4 Cell cycle organisation.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.component RFC4