Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p49440 Brassica napus
Aa31LG10G6250 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1301 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_273.1 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4147 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2199 Anthoceros agrestis
Actinidia00013 Actinidia chinensis
Actinidia14294 Actinidia chinensis
Ah.04g153610 Amaranthus hybridus
AL7G39380 Arabidopsis lyrata
Aqoxy2G02952 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4JB89L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q4RDUH Arachis hypogaea
AT4G15890 Arabidopsis thaliana
Atru.chr4.2862 Acer truncatum
Atru.chr4.2864 Acer truncatum
Atru.chr4.2865 Acer truncatum
Atru.chr4.2866 Acer truncatum
Atru.chr4.2867 Acer truncatum
Atru.chr4.2868 Acer truncatum
AUR62025017 Chenopodium quinoa
AUR62034308 Chenopodium quinoa
BcaC06g32972 Brassica carinata
BcaC06g33438 Brassica carinata
BcaC08g43650 Brassica carinata
BolC6t36150H Brassica oleracea
BolC7t45276H Brassica oleracea
BraA03t14045Z Brassica rapa
C06p10680 Brassica napus
C07p47490 Brassica napus
CAN.G484.37 Capsicum annuum
CANSAT78G1952 Cannabis sativa
CARHR290420 Cardamine hirsuta
Carub.0007s2577 Capsella rubella
Ca_01929_v3 Cicer arietinum L.
CBR_g31398 Chara braunii
Cc03_g01780 Coffea canephora
CDE02G0109 Ceratophyllum demersum
Cfa015397 Carpinus fangiana
Ciclev10004172m.g Citrus clementina
CiPaw.01G147700 Carya illinoinensis
ClCG06G005070 Citrullus lanatus
COL.COLO4_13851 Corchorus olitorius
Cpa.g.sc16.181 Carica papaya
Cre05.g241150 Chlamydomonas reinhardtii
Cre06.g266276 Chlamydomonas reinhardtii
CsaV3_UNG044300 Cucumis sativus L.
CsaV3_UNG067560 Cucumis sativus L.
CsaV3_UNG067570 Cucumis sativus L.
CsaV3_UNG075600 Cucumis sativus L.
CsaV3_UNG088690 Cucumis sativus L.
CsaV3_UNG088700 Cucumis sativus L.
CsaV3_UNG225770 Cucumis sativus L.
CSS0049595 Camellia sinensis var. sinensis
DCAR_002468 Daucus carota
DCAR_006102 Daucus carota
Dinv44369 Davidia involucrata
Duzib212G0336 Durio zibethinus
ECA232G4578 Erigeron canadensis
EL10Ac3g06610 Beta vulgaris
Eucgr.C00258 Eucalyptus grandis
Eucgr.C00332 Eucalyptus grandis
Eucgr.C00337 Eucalyptus grandis
Eucgr.C00455 Eucalyptus grandis
Eucgr.C00458 Eucalyptus grandis
Eucgr.C00460 Eucalyptus grandis
Eucgr.D00108 Eucalyptus grandis
FAN12G0087 Fragaria x ananassa
FAN12G4194 Fragaria x ananassa
FvH4_4g18310 Fragaria vesca
Glyma.09G044100 Glycine max
Glyma.15G149000 Glycine max
Gohir.A10G164700 Gossypium hirsutum
Gohir.D10G170900 Gossypium hirsutum
Gorai.011G191000 Gossypium raimondii
GSVIVG01017722001 Vitis vinifera
HanXRQChr16g0501031 Helianthus annuus
Haze_01188 Corylus avellana
Hma1.2p1_1185F.1_g265020 Hydrangea macrophylla
Hma1.2p1_1185F.1_g265030 Hydrangea macrophylla
HPP92_015965 Vanilla planifolia
HPP92_015972 Vanilla planifolia
Hund20543 Selenicereus undatus
Lalb_Chr18g0051631 Lupinus albus
Lalb_Chr18g0051641 Lupinus albus
Lj6C678T4 Lonicera japonica
Lj6g0019990 Lotus japonicus
Lj6g0027272 Lotus japonicus
Lsat_1_v5_gn_6_95741 Lactuca sativa
Lsat_1_v5_gn_9_42060 Lactuca sativa
Manes.03G196500 Manihot esculenta
Mapoly0098s0043 Marchantia polymorpha
MBI19_g25352_MAGBIO Magnolia biondii
MD16G1167900 Malus domestica
Medtr2g436590 Medicago truncatula
Medtr7g110590 Medicago truncatula
MELO3C021323.2 Cucumis melo
MELO3C035190.2 Cucumis melo
Migut.G00150 Erythranthe guttata
MSTRG.3907 Avicennia marina
Nitab4.5_0000570g0200 Nicotiana tabacum
Nitab4.5_0003466g0080 Nicotiana tabacum
Nn4g25794 Nelumbo nucifera
Oeu016245.1 Olea europaea
Oeu026316.2 Olea europaea
Os12g0548100 Oryza sativa ssp. japonica
Peaxi162Scf00646g00226 Petunia axillaris
PGR031G1922 Punica granatum
PGSC0003DMG401004707 Solanum tuberosum
Phvul.009G248800 Phaseolus vulgaris
Potri.010G013300 Populus trichocarpa
PRCOL_00006258 Prasinoderma coloniale
Prupe.1G134700 Prunus persica
Psat1g154920 Pisum sativum
PSO170G4998 Papaver somniferum
PSO210G3685 Papaver somniferum
QL06p009115 Quercus lobata
QL06p009350 Quercus lobata
QL06p009358 Quercus lobata
QL06p009360 Quercus lobata
RcHm_v2.0_Chr4g0422791 Rosa chinensis
Rhsim02G0008400 Rhododendron simsii
Sabra10G0008500 Salix brachista
SalBow2G2741 Salvia bowleyana
Sc13g0003410 Simmondsia chinensis
Sed0021428 Sechium edule
SEGI_21479 Sequoiadendron giganteum
SEGI_32620 Sequoiadendron giganteum
SGA_v2.0_scaffold67G22623 Striga asiatica
SHI00255 Sapria himalayana
SMO144G0076 Selaginella moellendorffii
Solyc12g099510.3 Solanum lycopersicum
Sopen12g034190 Solanum pennellii
Sp7g14340 Schrenkiella parvula
TAR370G0006 Trochodendron aralioides
THA.LOC104821780 Tarenaya hassleriana
Thecc.04G286100 Theobroma cacao
Thhalv10024228m.g Eutrema salsugineum
TPR.G26890 Trifolium pratense
TWI53G1101 Tripterygium wilfordii
unitig_37.g12399 Utricularia gibba
vmacro15227 Vaccinium macrocarpon
VMungo1309G1537 Vigna mungo
Zm00001eb410230 Zea mays

User provided reference genes

Program Settings